DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R2 and hrh3

DIOPT Version :10

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:NP_001020689.1 Gene:hrh3 / 561773 ZFINID:ZDB-GENE-040724-204 Length:473 Species:Danio rerio


Alignment Length:512 Identity:136/512 - (26%)
Similarity:218/512 - (42%) Gaps:119/512 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GLPTSTELVL----------------NATTSATSATLSPAMVATGGGGTTTPEPDLSEFLEALPN 106
            |:||:..|:.                |||:.|...|.               |...:::.:..|:
Zfish    13 GIPTAVSLMWKSGNHQSSNWSGMERENATSLADLDTF---------------ENRRAQYGQFSPS 62

  Fly   107 DRVGLLAFLFLFSFATVFGNSLVILAVIRERYLHTATNYFITSLAVADCLVGLVVMPFSALYEVL 171
            ..:.|...:.|..||||.||:|||||.:.|:.|.|..|:|..:||:||.|||...:|....| ||
Zfish    63 TSIFLTVLMTLLVFATVLGNALVILAFVVEKSLRTQGNFFFLNLAIADFLVGGFCIPVYIPY-VL 126

  Fly   172 ENTWFFGTDWCDIWRSLDVLFSTASILNLCVISLDRYWAITDPFSYPMRMTVKRAAGL-IAAVWI 235
            ...|..|...|.:|..:|.:..|||:.|:.:||.||:.::|...||..:..:.:.|.| :..||:
Zfish   127 TGEWRLGRGLCKLWLVVDYMLCTASVFNIVLISFDRFQSVTKAVSYRCQKGITKDAVLKMLCVWL 191

  Fly   236 CSSAISFPAIVWWRAARDGE-MPAYKC--TFTEHLGYLVFSSTISFYLPLLVMVFTYCRIY---- 293
            .:..:..|||:.|.....|. :|..:|  .|..:..:|:.:||:.|:.|.:.:.:....||    
Zfish   192 AAFLLYGPAIISWEHITGGSVVPDGECYAEFYFNWYFLMTASTVEFFTPFISVTYFNLSIYINIR 256

  Fly   294 -RAAV-------IQTRSLKIGTKQVLMASGELQLTL-----------------RIHRGGTTRDQQ 333
             |.|:       ::.||.|:..    :.:|::|...                 |..|..:|.   
Zfish   257 NRCAMREEQPTYVRLRSFKMKP----LGAGDVQRVFFVRPVEESRVADLASRSRCCRLASTA--- 314

  Fly   334 NQVSGGGGGGGGGGGGGGSLSHSHSHSHHHHHNHGGGTTTSTPEEPDDEPLSAL---------HN 389
             :||....|.|                  ........|....|....:|.:.|.         |:
Zfish   315 -KVSAAEFGNG------------------RQSKRRDSTLADLPPLQVEERILAASEAQFHYVDHS 360

  Fly   390 NGLARHR-----HMGKNFSLSRKLAKFAKEKKAAKTLGIVMGVFIICWLPFFVVNLLSGFCI-EC 448
            .|..|||     .:...|.|||       :||.||:|.:::.||.:||.|:.::.::...|. :|
Zfish   361 AGPHRHRPDMVASLANRFRLSR-------DKKVAKSLAVIVCVFGLCWAPYTLLMIIRAACHGQC 418

  Fly   449 IEHEEIVSAIVTWLGWINSCMNPVIYACWSRDFRRAFVRLLC----MCCPRKIRRKY 501
            ::|  .:..|..||.||||.:||::|......|:|||.:|||    ...|:.|.:||
Zfish   419 VQH--YLYEISFWLLWINSSINPILYPLCHSSFKRAFSKLLCPSKTKIQPQNIDQKY 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tmA_Dop1R2-like 122..485 CDD:320195 112/410 (27%)
TM helix 2 143..169 CDD:320195 10/25 (40%)
TM helix 3 182..212 CDD:320195 11/29 (38%)
TM helix 4 224..246 CDD:320195 6/22 (27%)
TM helix 5 266..295 CDD:320195 7/33 (21%)
TM helix 6 297..442 CDD:320195 35/182 (19%)
TM helix 7 453..478 CDD:320195 10/24 (42%)
hrh3NP_001020689.1 7tmA_Histamine_H3R 65..453 CDD:320423 116/423 (27%)
TM helix 1 66..92 CDD:320423 13/25 (52%)
TM helix 2 99..126 CDD:320423 11/27 (41%)
TM helix 3 137..167 CDD:320423 11/29 (38%)
TM helix 4 182..200 CDD:320423 4/17 (24%)
TM helix 5 225..255 CDD:320423 7/29 (24%)
TM helix 6 381..411 CDD:320423 12/36 (33%)
TM helix 7 421..446 CDD:320423 11/26 (42%)

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