DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R2 and htr2aa

DIOPT Version :10

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:XP_689300.7 Gene:htr2aa / 560808 ZFINID:ZDB-GENE-070912-500 Length:491 Species:Danio rerio


Alignment Length:463 Identity:137/463 - (29%)
Similarity:213/463 - (46%) Gaps:74/463 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SPSPSFFGSYNISEDVYFYFNGLPTSTE--LVLNATTSATSATLSPAMVATGGGGTTTPEPDLSE 99
            :|||..... |:..:.....|...|.||  |:.|.:....|:..:..:.:....|.||.|     
Zfish    30 TPSPDIMLG-NVVHNSSIGCNRSWTDTEASLLPNLSMIGISSERTELLSSQRCNGETTKE----- 88

  Fly   100 FLEALPNDRVGLLAFLFLFSFATVFGNSLVILAVIRERYLHTATNYFITSLAVADCLVGLVVMPF 164
              |.:..:...||  :.:....||.||.|||:||..||.|..|||||:.||||||.|:||:|||.
Zfish    89 --ELVRKNWAALL--ILVVVIVTVAGNILVIMAVNLERKLQNATNYFLMSLAVADMLLGLLVMPV 149

  Fly   165 SALYEVLENTWFFGTDWCDIWRSLDVLFSTASILNLCVISLDRYWAITDPFSYPMRMTVKRAAGL 229
            |.:..|...:|.|....|.:|..||||||||||::||.||||||.||.:|..:....:..||...
Zfish   150 SMVTIVYGYSWPFPASLCPMWIYLDVLFSTASIMHLCAISLDRYVAIRNPIRHNRSNSRSRARAK 214

  Fly   230 IAAVWICSSAISFPAIV-----WWRAARDGEMPAYKCTFTEHLGYLVFSSTISFYLPLLVMVFTY 289
            |.|||..|:.||.|..|     ..:..:||     .|..|:: .:::..|.::|::||.:||.||
Zfish   215 ITAVWTISAGISMPIPVLGLRDHTKVFKDG-----SCLLTDN-SFVLIGSFVAFFVPLTIMVVTY 273

  Fly   290 CRIYRAAVIQTRSLKIGTKQVLMASGELQLTLRIHRGGTTRDQQNQVSGGGGGGGGGGGGGGSLS 354
              ....:.:|:.:.....:.|........|||....|.:....:.::               .|.
Zfish   274 --FLTISALQSEATLCLDQLVPRPKWSTGLTLNFLPGPSFSPSEKKL---------------FLR 321

  Fly   355 HSHSHSHHHHHNHGGGTTTSTPEEPDDEPLSALHNNGLARHRHMGKNFSLSRKLAKFAKEKKAAK 419
            .|.|      ...|..:...||.              ..||           .:...:.|:||:|
Zfish   322 RSLS------REPGADSGVVTPP--------------FGRH-----------NMQSISNEQKASK 355

  Fly   420 TLGIVMGVFIICWLPFFVVNLLSGFCIECIEHEEIVSAIV---TWLGWINSCMNPVIYACWSRDF 481
            .||:|..:|::.|.|||:.|:|:..|.....:..|::.::   .|:|:::|.:||::|..:::.:
Zfish   356 VLGVVFFLFVVMWCPFFITNVLAVVCEPNACNANIMNRLLNVFVWVGYLSSAVNPLVYTLFNKTY 420

  Fly   482 RRAFVRLL 489
            |.||.|.:
Zfish   421 RSAFARYI 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tmA_Dop1R2-like 122..485 CDD:320195 116/370 (31%)
TM helix 2 143..169 CDD:320195 17/25 (68%)
TM helix 3 182..212 CDD:320195 21/29 (72%)
TM helix 4 224..246 CDD:320195 10/21 (48%)
TM helix 5 266..295 CDD:320195 8/28 (29%)
TM helix 6 297..442 CDD:320195 27/144 (19%)
TM helix 7 453..478 CDD:320195 7/27 (26%)
htr2aaXP_689300.7 7tm_GPCRs 94..424 CDD:475119 118/385 (31%)
TM helix 1 96..120 CDD:410628 11/25 (44%)
TM helix 2 129..151 CDD:410628 15/21 (71%)
TM helix 3 168..190 CDD:410628 14/21 (67%)
TM helix 4 213..229 CDD:410628 7/15 (47%)
TM helix 5 251..274 CDD:410628 8/25 (32%)
TM helix 6 354..376 CDD:410628 9/21 (43%)
TM helix 7 392..417 CDD:410628 6/24 (25%)

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