DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R2 and si:dkey-247m21.3

DIOPT Version :10

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:XP_017208337.2 Gene:si:dkey-247m21.3 / 559089 ZFINID:ZDB-GENE-091204-249 Length:390 Species:Danio rerio


Alignment Length:438 Identity:134/438 - (30%)
Similarity:194/438 - (44%) Gaps:117/438 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 RVGLLAFLFLFSFATVFGNSLVILAVIRERYLH-TATNYFITSLAVADCLVGLVVMPFSALYEVL 171
            |:.|...|......|..||.||::|:.::|.|. ..||:||.|||.||.||.|||||.:|: |:.
Zfish    22 RITLSIVLVTIIIMTALGNLLVMVALCKDRQLRKKKTNFFIVSLAFADLLVALVVMPLAAI-ELT 85

  Fly   172 ENTWFFGTDWCDIWRSLDVLFSTASILNLCVISLDRYWAI-TDPFSYPMRMTVKRAAGLIAAVWI 235
            ...|.:|..:|.:..|||||.:|||||:||.|:||||:|| ..|..|..:||..|.:.::...|:
Zfish    86 TGKWNYGETFCLVRTSLDVLLTTASILHLCCIALDRYYAICCQPLVYNNKMTPVRVSLMLVGCWV 150

  Fly   236 CSSAISF-PAIVWW--------------RAARDGEMPAYKCTFTEHLGYLVFSSTISFYLPLLVM 285
            ....||| |.:..|              .::|:.     .|.|..:..|.:..|.::||:||::|
Zfish   151 IPFFISFLPIMQSWNTIGIESFIEQRKLNSSRNS-----TCVFMVNQPYALVCSAVAFYVPLVLM 210

  Fly   286 VFTYCRIYRAAVIQTRSLKIGTKQVLMASGELQLTLRIHRGGTTRDQQNQVSGGGGGGGGGGGGG 350
            |..|.|||..|:...|  :||:               :||.|:                      
Zfish   211 VLAYQRIYVTAMGHAR--RIGS---------------LHRAGS---------------------- 236

  Fly   351 GSLSHSHSHSHHHHHNHGGGTTTSTPEEPDDEPLSALHNNGLARHRHMGKNFSLSRKLAKFAKEK 415
                                ..|||....|....|.:.|                        |.
Zfish   237 --------------------APTSTYPNNDQHGSSRIKN------------------------ET 257

  Fly   416 KAAKTLGIVMGVFIICWLPFFVVNLLSGFCIECIEHEEIVSAIVTWLGWINSCMNPVIYACWSRD 480
            ||||||.::||.|.:||.||||.|::..|....:..:...:.:  |||:|||.:||.:||..:|.
Zfish   258 KAAKTLAVIMGCFCLCWAPFFVTNVVDPFINYSVPWQMWTAWL--WLGYINSGLNPFLYAFLNRA 320

  Fly   481 FRRAFVRLLCMCCPRKIRRK--YQPTMRSKSQC--HVAAAMVAASTSF 524
            |||||:.:|| |...:..|:  :.|:    .||  .|....::...||
Zfish   321 FRRAFLMILC-CGDERYARQGGFSPS----RQCSESVNGTSISLRLSF 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tmA_Dop1R2-like 122..485 CDD:320195 119/379 (31%)
TM helix 2 143..169 CDD:320195 17/25 (68%)
TM helix 3 182..212 CDD:320195 20/30 (67%)
TM helix 4 224..246 CDD:320195 6/22 (27%)
TM helix 5 266..295 CDD:320195 12/28 (43%)
TM helix 6 297..442 CDD:320195 29/144 (20%)
TM helix 7 453..478 CDD:320195 10/24 (42%)
si:dkey-247m21.3XP_017208337.2 7tmA_5-HT4 23..325 CDD:320184 121/392 (31%)
TM helix 1 24..50 CDD:320184 8/25 (32%)
TM helix 2 58..84 CDD:320184 17/26 (65%)
TM helix 3 96..126 CDD:320184 19/29 (66%)
TM helix 4 139..162 CDD:320184 6/22 (27%)
TM helix 5 191..220 CDD:320184 12/28 (43%)
TM helix 6 254..284 CDD:320184 18/53 (34%)
TM helix 7 293..318 CDD:320184 10/26 (38%)

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