DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R2 and Octbeta2R

DIOPT Version :10

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster


Alignment Length:613 Identity:190/613 - (30%)
Similarity:264/613 - (43%) Gaps:161/613 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 DGLNQTQTRSPSPSFFGSYNISEDVYFYFNGLPTSTELVLNATTSATSATLSPAMVATG------ 86
            ||.:..|...|.       .|..:...|...|.|...:...|.|:|.....:.|:.|||      
  Fly    35 DGGSGNQAEQPG-------GIVSNPISYGQSLTTLARVTAAALTTAAMLHTTNALAATGSSSASN 92

  Fly    87 ---GG-----GTTTP----------------------------------EPDLSEFLEALPNDRV 109
               ||     ||.||                                  .||         .|.:
  Fly    93 SSTGGIALPLGTATPATHELNATQPFGGSGLNFNESGAGLSDHHHHQQHNPD---------EDWL 148

  Fly   110 GLLAFLF------LFSFATVFGNSLVILAVIRERYLHTATNYFITSLAVADCLVGLVVMPFSALY 168
            ..:.::|      |...|.:.||.|||::|:|.|.|...||||:.|||:||.:|.::.|.|:...
  Fly   149 DNIVWVFKAFVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSV 213

  Fly   169 EVLENTWFFGTDWCDIWRSLDVLFSTASILNLCVISLDRYWAITDPFSYPMRMTVKRAAG-LIAA 232
            :| ...|.|....||:|.||||.|||||||:||.||:|||:||..|..||:.|| ||..| ::..
  Fly   214 QV-TGRWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMT-KRVVGIMLLN 276

  Fly   233 VWICSSAISF-PAIVWWRAARDGEM-----PAYKCTFTEHLGYLVFSSTISFYLPLLVMVFTYCR 291
            .||..:.:|| |..:.|......:.     |. :|:|..:..|.|.||:|||::|..:|:|||..
  Fly   277 TWISPALLSFLPIFIGWYTTPQHQQFVIQNPT-QCSFVVNKYYAVISSSISFWIPCTIMIFTYLA 340

  Fly   292 IYRAAVIQTRSLKIGTKQVLMASGELQLTLRIHRGGTTRDQQNQVSGGGGGGGGGGGGGGSLSHS 356
            |:|.|..|       .||::|..|...|   :||      ...|.||....|             
  Fly   341 IFREANRQ-------EKQLMMRHGNAML---MHR------PSMQPSGEALSG------------- 376

  Fly   357 HSHSHHHHHNHGGGTTTSTPEEPDDEPLSALHNNGLARHRHMGKNFSLSRKLAKFAKEKKAAKTL 421
                       .|.:.|.|..|.:.|     |.....:|            |.|..:|.|||:||
  Fly   377 -----------SGSSKTLTLHEVEQE-----HTPTKDKH------------LIKMKREHKAARTL 413

  Fly   422 GIVMGVFIICWLPFFVVNLLSGFCIECIEHEEIVSAIVTWLGWINSCMNPVIYACWSRDFRRAFV 486
            ||:||.||:||||||:...||..|.|| :..:||.:|:.|:|:.||.:||:|||.::||||.||.
  Fly   414 GIIMGTFILCWLPFFLWYTLSMTCEEC-QVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFR 477

  Fly   487 R-LLCMCC--------PRKI---RRKYQPTMRSKSQCHVAAAMVAASTSFGYHSVNQIDRTLMXR 539
            . |||:.|        |..|   |...:...|:||   |.:.....||:..:...:|:...| .|
  Fly   478 NTLLCLFCNWWKDRHLPLDIDIRRSSLRYDQRAKS---VYSESYLNSTTPSHRRQSQMVDNLXYR 539

  Fly   540 QLSSCS--------TCSGGSNCGGSRSA 559
            ..:..:        ..:|||..||..:|
  Fly   540 DEALLTPIAQQQQRLAAGGSRLGGQLAA 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tmA_Dop1R2-like 122..485 CDD:320195 139/369 (38%)
TM helix 2 143..169 CDD:320195 12/25 (48%)
TM helix 3 182..212 CDD:320195 22/29 (76%)
TM helix 4 224..246 CDD:320195 8/23 (35%)
TM helix 5 266..295 CDD:320195 13/28 (46%)
TM helix 6 297..442 CDD:320195 39/144 (27%)
TM helix 7 453..478 CDD:320195 12/24 (50%)
Octbeta2RNP_001163596.2 7tmA_DmOct-betaAR-like 155..476 CDD:320194 142/381 (37%)
TM helix 1 155..181 CDD:320194 9/25 (36%)
TM helix 2 188..214 CDD:320194 12/25 (48%)
TM helix 3 226..256 CDD:320194 22/29 (76%)
TM helix 4 268..291 CDD:320194 7/22 (32%)
TM helix 5 315..344 CDD:320194 13/28 (46%)
TM helix 6 404..434 CDD:320194 18/29 (62%)
TM helix 7 444..469 CDD:320194 12/24 (50%)

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