DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R2 and CG13579

DIOPT Version :10

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster


Alignment Length:745 Identity:163/745 - (21%)
Similarity:251/745 - (33%) Gaps:213/745 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 LSEFLEALPNDRVGLLAFLFLFSFATVFGNSLVILAVIRER---YLHTATNYFITSLAVADCLVG 158
            ::|.:||:         .:.:.:...:..|.|||..:...|   |:|....|.:||||:.|..:|
  Fly    35 IAETIEAV---------LILVLTLGVIGANCLVIFVINNRRYAAYIHQQPRYLLTSLALNDLTIG 90

  Fly   159 LVVMPFSALYEVLENTWFFGTDWCDIWRSLDVLFSTASILNLCVISLDRYWAITDPFSYPMRMTV 223
            |::.|| .|...|.:.|.:|..:|.|...|....|..|.:.|..:::|||.....|..|....:.
  Fly    91 LLITPF-GLMPALFHCWPYGEIFCQIQALLRGALSQQSAVILVCMAVDRYMCALHPRRYYQHSSK 154

  Fly   224 KRAAGLIAAVWICSSAISFPAIVWWRAARDGEMPAYKC-TFTEHLGYLVFSSTISFYLPLLVMVF 287
            |....:::..||.|..: |..:|..:...........| .|.....|.:. ||.:.|.| ..||.
  Fly   155 KGCVAILSLTWIISLTV-FGFLVLPKGYYFNNTGLMACEPFYSKPSYRIL-STCALYFP-TTMVL 216

  Fly   288 TYCRIYRAAVIQTR-SLKIGTKQVLMA----------SGELQLTLRIHRGGTTRDQQNQVSGGGG 341
            .||  |.::...:| .|...|..:..|          :...||.:..|:      |.:|.:    
  Fly   217 MYC--YGSSFHMSRFRLNDPTMPLTAAAHHPHPHPHPTAAQQLQMHQHQ------QHHQQA---- 269

  Fly   342 GGGGGGGGGGSLSHSHSH-----SHHHHHNHGGGTTTSTPEEPDDEPLSALHNNGLARHRHMGKN 401
                  |....|.|.|||     ||.:|.||.|......|  |....||...:.|||...:|.. 
  Fly   270 ------GMHSHLYHGHSHHPSHPSHPNHPNHHGHPHHHGP--PVMGHLSMAMSMGLAGMPNMTN- 325

  Fly   402 FSLSRKLAKFAKEKKAAKT----LGIVMGVFIICWLPFFVVNLLSGFCIECIEHEEIVSA----- 457
             .:::|:....::..:..|    ..|.:| ||:...|:.:              :|||:|     
  Fly   326 -KITKKIVPIQEKNSSGSTSRSMAAISLG-FIVMVTPWTI--------------QEIVTACTGSK 374

  Fly   458 -------IVTWLGWINSCMNPVIYACWSRDFRRAFVRLL-CMCCPRKIRRKYQPTMRSKSQ-CHV 513
                   :|||....||..||.:|...:.||||...:|: ..|.|      ::.|...||. ||:
  Fly   375 LPPFLDFLVTWTALSNSLWNPFMYWLLNSDFRRMSRQLMPNKCFP------HEDTPEHKSGCCHI 433

  Fly   514 AAAMVAASTSFGYHSVNQIDRTLM--------XRQLSSCSTCSGGSNCGGSRSAHHQHHSSGTAT 570
            .|              |..:.|.:        .|.........||.:.||.        |||...
  Fly   434 NA--------------NDFEITTLPIPPEPPSSRPPGGAGGGGGGPSSGGP--------SSGGGV 476

  Fly   571 PSSSQRS----CTRCQSFHRHHHRSRRRSSGMQMRGDYNSTTAVNSALAKTIVTISAPPVAAASA 631
            .||...|    |.|.::      .|..||:...:||...                          
  Fly   477 ASSIGGSVLGICGRSRT------NSLSRSASQYIRGTMG-------------------------- 509

  Fly   632 SSLHLGVGGRPSSVSTLTIASVPPTLSGSGS-----------PGGSVSGATTPLAPSL---KALT 682
                   ||..:..:|.|.::..|.:.|...           ..|:::.....|.|.|   ..|.
  Fly   510 -------GGVHNHQATETFSTTRPDIEGLSEKYWGEILERTVSSGNLNAMQKHLPPHLPYAHHLV 567

  Fly   683 PGPSNSSGHH----VSFMPMTGMK-RLRSSNASLGSPNGIIST-------------------VAG 723
            ........||    .||...:.:: .|..|.|:..:..|..|.                   .|.
  Fly   568 HQIHQPQQHHQQQTTSFSKASDLQLNLNLSQAATAAELGKFSNSEPKLCEHLFHDVNCAKSKAAN 632

  Fly   724 ADTTSAPSL--------IDASEDQVQMRNQ 745
            .|..|:..|        | .:||.:..:||
  Fly   633 GDGESSGKLACGRSIPDIXYAEDVILAKNQ 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tmA_Dop1R2-like 122..485 CDD:320195 102/398 (26%)
TM helix 2 143..169 CDD:320195 11/25 (44%)
TM helix 3 182..212 CDD:320195 9/29 (31%)
TM helix 4 224..246 CDD:320195 5/21 (24%)
TM helix 5 266..295 CDD:320195 10/28 (36%)
TM helix 6 297..442 CDD:320195 36/164 (22%)
TM helix 7 453..478 CDD:320195 12/36 (33%)
CG13579NP_001261169.1 7tm_classA_rhodopsin-like 41..>220 CDD:410626 50/193 (26%)
TM helix 1 41..65 CDD:410626 5/32 (16%)
TM helix 2 75..101 CDD:410626 11/26 (42%)
TM helix 3 113..143 CDD:410626 9/29 (31%)
TM helix 4 156..175 CDD:410626 4/19 (21%)
TM helix 5 200..220 CDD:410626 9/23 (39%)
7tm_GPCRs <334..407 CDD:475119 20/87 (23%)
TM helix 6 340..366 CDD:410628 6/40 (15%)
TM helix 7 377..402 CDD:410628 8/24 (33%)

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