DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dop1R2 and Htr1d

DIOPT Version :10

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:NP_036984.1 Gene:Htr1d / 25323 RGDID:2847 Length:374 Species:Rattus norvegicus


Alignment Length:444 Identity:159/444 - (35%)
Similarity:214/444 - (48%) Gaps:97/444 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GLPTSTELVLNATTSATSATLSPAMVATGGGGTTTPEPDLSEFLEALPNDRVGLLAFLFLFSFAT 122
            |||....   |.:.:||.|.                :|   |.|:||   |:.|:..|.:.:.||
  Rat    10 GLPQEAS---NRSLNATGAW----------------DP---EVLQAL---RISLVVVLSIITLAT 49

  Fly   123 VFGNSLVILAVIRERYLHTATNYFITSLAVADCLVGLVVMPFSALYEVLENTWFFGTDWCDIWRS 187
            |..|:.|:..::..:.|||..||.|.|||..|.||.::|||.|..| ....||.||...||||.|
  Rat    50 VLSNAFVLTTILLTKKLHTPANYLIGSLATTDLLVSILVMPISIAY-TTTRTWNFGQILCDIWVS 113

  Fly   188 LDVLFSTASILNLCVISLDRYWAITDPFSYPMRMTVKRAAGLIAAVWICSSAISFPAIVWWRAAR 252
            .|:...|||||:||||:|||||||||...|..|.|...||.:|||||..|..||.|.:.|.:|..
  Rat   114 SDITCCTASILHLCVIALDRYWAITDALEYSKRRTAGHAAAMIAAVWAISICISIPPLFWRQATA 178

  Fly   253 DGEMPAYKCTF-TEHLGYLVFSSTISFYLPLLVMVFTYCRIY---RAAVIQTRSL---KIGTKQV 310
            ..||.  .|.. |..:.|.::|:..:||:|.::::..|.|||   |:.::...||   :..|.|:
  Rat   179 HEEMS--DCLVNTSQISYTIYSTCGAFYIPSILLIILYGRIYVAARSRILNPPSLYGKRFTTAQL 241

  Fly   311 LMASGELQLTLRIHRGGTTRDQQNQVSGGGGGGGGGGGGGGSLSHSHSHSHHHHHNHGGGTTTST 375
            :.                                  |..|.||. |.:.|.|..|.|..|     
  Rat   242 IT----------------------------------GSAGSSLC-SLNPSLHESHTHTVG----- 266

  Fly   376 PEEPDDEPLSALHNN----GLARHRHMGKNFSLSRKLAKFAKEKKAAKTLGIVMGVFIICWLPFF 436
                     |.|..|    .||       :..|.||....|:|:||.|||||::|.|||||||||
  Rat   267 ---------SPLFFNQVKIKLA-------DSILERKRISAARERKATKTLGIILGAFIICWLPFF 315

  Fly   437 VVNLLSGFCIE-CIEHEEIVSAIVTWLGWINSCMNPVIYACWSRDFRRAFVRLL 489
            ||:|:...|.: |..|..:.. ..||||::||.:|||||..::.|||:||.|::
  Rat   316 VVSLVLPICRDSCWIHPALFD-FFTWLGYLNSLINPVIYTVFNEDFRQAFQRVV 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tmA_Dop1R2-like 122..485 CDD:320195 140/374 (37%)
TM helix 2 143..169 CDD:320195 13/25 (52%)
TM helix 3 182..212 CDD:320195 21/29 (72%)
TM helix 4 224..246 CDD:320195 11/21 (52%)
TM helix 5 266..295 CDD:320195 9/31 (29%)
TM helix 6 297..442 CDD:320195 44/151 (29%)
TM helix 7 453..478 CDD:320195 11/24 (46%)
Htr1dNP_036984.1 7tmA_5-HT1B_1D 32..364 CDD:320455 146/394 (37%)
TM helix 1 37..63 CDD:320455 7/25 (28%)
TM helix 2 70..96 CDD:320455 14/26 (54%)
TM helix 3 108..138 CDD:320455 21/29 (72%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 132..134 1/1 (100%)
TM helix 4 150..173 CDD:320455 11/22 (50%)
TM helix 5 191..220 CDD:320455 9/28 (32%)
TM helix 6 291..321 CDD:320455 22/29 (76%)
TM helix 7 332..357 CDD:320455 11/25 (44%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 349..353 3/3 (100%)

Return to query results.
Submit another query.