DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R2 and Htr1b

DIOPT Version :10

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:NP_071561.1 Gene:Htr1b / 25075 RGDID:2846 Length:386 Species:Rattus norvegicus


Alignment Length:462 Identity:152/462 - (32%)
Similarity:215/462 - (46%) Gaps:94/462 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 TQTRSPSPSFFGSYNISEDVYFYFNGLPTSTELVLNATTSATSATLSPAMVATGGGGTTTPEPDL 97
            :||..|..:.  |:|.|.|.|.|.:.:                                      
  Rat    16 SQTGVPLANL--SHNCSADDYIYQDSI-------------------------------------- 40

  Fly    98 SEFLEALPNDRVGLLAFLFLFSFATVFGNSLVILAVIRERYLHTATNYFITSLAVADCLVGLVVM 162
                 ||| .:|.|:|.|.|.:.||...|:.||..|.|.|.|||..||.|.||||.|.||.::||
  Rat    41 -----ALP-WKVLLVALLALITLATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVM 99

  Fly   163 PFSALYEVLENTWFFGTDWCDIWRSLDVLFSTASILNLCVISLDRYWAITDPFSYPMRMTVKRAA 227
            |.|.:|.| ...|..|...||.|.|.|:...||||::||||:|||||||||...|..:.|.||||
  Rat   100 PISTMYTV-TGRWTLGQVVCDFWLSSDITCCTASIMHLCVIALDRYWAITDAVDYSAKRTPKRAA 163

  Fly   228 GLIAAVWICSSAISFPAIVWWRAARDGEMPAYKC-TFTEHLGYLVFSSTISFYLPLLVMVFTYCR 291
            .:|..||:.|.:||.|...|.:|..:.|:  ..| ..|:|:.|.|:|:..:||||.|:::..|.|
  Rat   164 IMIVLVWVFSISISLPPFFWRQAKAEEEV--LDCFVNTDHVLYTVYSTVGAFYLPTLLLIALYGR 226

  Fly   292 IYRAAVIQTRSLKIGTKQVLMASGELQLTLRIHRGGTTRDQQNQVSGGGGGGGGGGGGGGSLSHS 356
            ||    ::.||..:  ||....:|:     |:.|.....|..              |...|::..
  Rat   227 IY----VEARSRIL--KQTPNKTGK-----RLTRAQLITDSP--------------GSTSSVTSI 266

  Fly   357 HSHSHHHHHNHGGGTTTSTPEEPDDEPLSALHNNGLARHRHMGKNFSLSRKLAKFAKEKKAAKTL 421
            :|.               .||.|.:.......|....|    ..:..|.:|....|:|:||.|||
  Rat   267 NSR---------------VPEVPSESGSPVYVNQVKVR----VSDALLEKKKLMAARERKATKTL 312

  Fly   422 GIVMGVFIICWLPFFVVNLLSGFCIECIEHEEIVSAIVTWLGWINSCMNPVIYACWSRDFRRAFV 486
            ||::|.||:||||||:::|:...|.:.......:.....|||::||.:||:||...:.||::||.
  Rat   313 GIILGAFIVCWLPFFIISLVMPICKDACWFHMAIFDFFNWLGYLNSLINPIIYTMSNEDFKQAFH 377

  Fly   487 RLLCMCC 493
            :|:...|
  Rat   378 KLIRFKC 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tmA_Dop1R2-like 122..485 CDD:320195 130/363 (36%)
TM helix 2 143..169 CDD:320195 14/25 (56%)
TM helix 3 182..212 CDD:320195 19/29 (66%)
TM helix 4 224..246 CDD:320195 11/21 (52%)
TM helix 5 266..295 CDD:320195 13/28 (46%)
TM helix 6 297..442 CDD:320195 37/144 (26%)
TM helix 7 453..478 CDD:320195 9/24 (38%)
Htr1bNP_071561.1 7tmA_5-HT1B_1D 42..376 CDD:320455 138/381 (36%)
TM helix 1 47..73 CDD:320455 10/25 (40%)
TM helix 2 80..106 CDD:320455 14/25 (56%)
TM helix 3 118..148 CDD:320455 19/29 (66%)
DRY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 142..144 1/1 (100%)
TM helix 4 160..183 CDD:320455 11/22 (50%)
TM helix 5 201..230 CDD:320455 13/32 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..276 7/49 (14%)
TM helix 6 303..333 CDD:320455 19/29 (66%)
TM helix 7 344..369 CDD:320455 9/24 (38%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 361..365 2/3 (67%)

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