DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dop1R2 and ser-5

DIOPT Version :10

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:NP_492273.2 Gene:ser-5 / 184572 WormBaseID:WBGene00008890 Length:454 Species:Caenorhabditis elegans


Alignment Length:440 Identity:115/440 - (26%)
Similarity:184/440 - (41%) Gaps:117/440 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 EALPNDRVGLLAF-LFLFSFATVFGNSLVILAVIRERYLHTATNYFITSLAVADCLVGLVVMPFS 165
            |.||...:.||.. ..:....|:|||.||:.  .:.|...|.|...:.:|.:.|.|||::|:|..
 Worm    55 EQLPPAVLVLLCIPAVIIILLTIFGNLLVLF--FKARVGRTNTTLLVWNLGLTDFLVGVIVLPMG 117

  Fly   166 ALYEVLENTWFFGTDWCDIWRSLDVLFSTASILNLCVISLDRYWAITDPFSYPMRMTVKRAAGLI 230
            |:| ::...|.||...|.:|.:.||.|.|.|::.:||||:|||.|:|.|..|...:|..:...::
 Worm   118 AVY-LIYRKWIFGRFLCRLWVAADVTFCTCSVVTICVISVDRYLAVTRPLRYKSIVTKTKVISVM 181

  Fly   231 AAVWICSSAISFPAIVWWRAARDGEMP-AYK---CTFTEHLGYLVFSSTISFYLPLLVMVFTYCR 291
            ..:||.||:|....:.|       |.| .|.   |.....:.:|..|...:|:||..|.:..|.|
 Worm   182 TIIWIFSSSILLTTVRW-------EQPECYDDSLCFVGNEIRHLAHSVVFAFFLPASVTLTLYWR 239

  Fly   292 IYRAAVIQTRSLKIGTKQVLMASGEL-------QLTLRIHRGGTTRDQQNQVSGGGGGGGGGGGG 349
            ||:.|..:.::|..|...:|.::...       |.|||:|.|.|                     
 Worm   240 IYKLARNRQKALDRGFLMILGSNMNFLTNTLSQQTTLRVHFGKT--------------------- 283

  Fly   350 GGSLSHSHSHSHHHHHNHGGGTTTSTPEEPDDEPLSALHNNGLARHRHMGKNFSLSRKLAKFAKE 414
                                                    ||:..|:         |::.:  ..
 Worm   284 ----------------------------------------NGMVEHQ---------RRVLR--TH 297

  Fly   415 KKAAKTLGIVMGVFIICWLPFFVVNLLSGFCIECIEHEEIVSAIVTWLGWINSCMNPVIYACWSR 479
            ::.|||||:|...|:.||||||.:.|.:..|..|:  ..|...:.:|||:.||.:||:||:...:
 Worm   298 ERIAKTLGVVSCSFLFCWLPFFGLYLTNYKCSGCV--PPIAIDVASWLGYCNSMLNPIIYSFTVK 360

  Fly   480 DFRRAFVRLLC-------MCCP--------------RKIRRKYQPTMRSK 508
            :|:|:..||:.       .|.|              |.:.|..:..|:::
 Worm   361 EFKRSAFRLVVPIWQFVNRCLPFVPAPPDNILQRIARHVHRHKEKEMQTR 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tmA_Dop1R2-like 122..485 CDD:320195 103/373 (28%)
TM helix 2 143..169 CDD:320195 9/25 (36%)
TM helix 3 182..212 CDD:320195 15/29 (52%)
TM helix 4 224..246 CDD:320195 5/21 (24%)
TM helix 5 266..295 CDD:320195 10/28 (36%)
TM helix 6 297..442 CDD:320195 28/151 (19%)
TM helix 7 453..478 CDD:320195 10/24 (42%)
ser-5NP_492273.2 7tmA_amine_R-like 64..365 CDD:320098 104/384 (27%)
TM helix 1 64..88 CDD:320098 8/25 (32%)
TM helix 2 95..122 CDD:320098 10/27 (37%)
TM helix 3 133..163 CDD:320098 15/29 (52%)
TM helix 4 175..195 CDD:320098 5/19 (26%)
TM helix 5 214..294 CDD:320098 25/149 (17%)
TM helix 6 295..325 CDD:320098 14/31 (45%)
TM helix 7 334..359 CDD:320098 10/24 (42%)

Return to query results.
Submit another query.