DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R2 and octr-1

DIOPT Version :10

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:NP_001024569.1 Gene:octr-1 / 184469 WormBaseID:WBGene00006411 Length:408 Species:Caenorhabditis elegans


Alignment Length:437 Identity:141/437 - (32%)
Similarity:199/437 - (45%) Gaps:97/437 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 AFLFLFSFATV-----FGNSLVILAVIRERYLH-TATNYFITSLAVADCLVGLVVMPFSALYEVL 171
            |.|.:.|..||     |||.||::.|.|:|.|. ...|:.|.||||||.||||:|||.:..||::
 Worm    21 AVLTISSMLTVMLLIIFGNLLVVVTVYRDRKLRMQRQNWLIVSLAVADMLVGLLVMPLTLTYEIV 85

  Fly   172 ENTWFFGTDWCDIWRSLDVLFSTASILNLCVISLDRYWAITDPFSYPMRMTVKRAAGLIAAVWIC 236
             ..|..|...|:||.:|||||.|||||::|.||||||:::|.|.:||...|..|....|...||.
 Worm    86 -GEWTMGNILCEIWLALDVLFVTASILHICAISLDRYFSVTSPLTYPATRTPLRMFIYIGVSWIV 149

  Fly   237 SSAISFPAIVWWRAAR-DGEMPAYKCTFTEHLGYLVFSSTISFYLPLLVMVFTYCRIYRAAVIQT 300
            |..|..|.|..||..| :||     |:.:..|||:::||..|||:|:::::..|.:||...:..:
 Worm   150 SLLICLPPIFGWRPERAEGE-----CSVSTDLGYVLYSSLGSFYIPVVILIIVYAKIYSITIRHS 209

  Fly   301 RSLKIGTKQVLMASGELQLTLRIHRGGTTRDQQNQVSGGGGGGGGGGGGGGSLSHSHSHSHHHHH 365
            |       |.|..:.....||.:.   |.|...|:                    .::..:....
 Worm   210 R-------QRLKETERRDHTLNML---TIRSSTNE--------------------RYNMEYELEE 244

  Fly   366 NHGGGTTTSTPEEPDDE--------------------------------PLSALHNNGLA---RH 395
            |       |.|.|.:.|                                .|...||:..|   ..
 Worm   245 N-------SDPIEDEKEKVVTNRDMINKVCWQLRKISEELPRQGVKVSIALDTNHNSPPASDLTR 302

  Fly   396 RHMGKNFSLSRKLAKFAKEKKAAKTLGIVMGVFIICWLPFFVVNLLSGFCIECIEHE--EIVSAI 458
            :...|.|...||....|||::|...|||::..||:.|||||::.::..|     .||  .:|...
 Worm   303 KLEEKKFCEKRKRKLKAKERQATLLLGIILSAFILSWLPFFLIYVIGAF-----GHEAPPLVFKF 362

  Fly   459 VTWLGWINSCMNPVIYACWSRDFRRAFVRLLCMCCPRKIRRKYQPTM 505
            ..|||:.||.:|||||..::|:|:|...:.|     .|..|...|.|
 Worm   363 FFWLGYCNSGINPVIYTVFNREFKRGLCKQL-----HKFERFIHPLM 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tmA_Dop1R2-like 122..485 CDD:320195 133/406 (33%)
TM helix 2 143..169 CDD:320195 15/25 (60%)
TM helix 3 182..212 CDD:320195 20/29 (69%)
TM helix 4 224..246 CDD:320195 7/21 (33%)
TM helix 5 266..295 CDD:320195 12/28 (43%)
TM helix 6 297..442 CDD:320195 35/179 (20%)
TM helix 7 453..478 CDD:320195 11/24 (46%)
octr-1NP_001024569.1 7tmA_alpha2_AR 22..389 CDD:320187 135/414 (33%)
TM helix 1 23..49 CDD:320187 10/25 (40%)
TM helix 2 57..83 CDD:320187 15/25 (60%)
TM helix 3 95..125 CDD:320187 20/29 (69%)
TM helix 4 137..160 CDD:320187 8/22 (36%)
TM helix 5 175..204 CDD:320187 12/28 (43%)
TM helix 6 319..349 CDD:320187 14/29 (48%)
TM helix 7 357..382 CDD:320187 11/24 (46%)

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