DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R2 and ser-2

DIOPT Version :10

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:NP_001024339.1 Gene:ser-2 / 182110 WormBaseID:WBGene00004777 Length:455 Species:Caenorhabditis elegans


Alignment Length:482 Identity:150/482 - (31%)
Similarity:226/482 - (46%) Gaps:94/482 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 VLNATTSATSATLSPAMVATGGGGTTTPEPDLSEFLEALPNDRVGLLAFLFLFSFATVFGNSLVI 130
            |:||:::.::.||.|..:..    |:...|.:...:|.:    :|.:.:|.:.:. ||.||:||:
 Worm    24 VINASSAVSTTTLPPLDIPM----TSMKPPSIIPTVELV----LGTITYLVIIAM-TVVGNTLVV 79

  Fly   131 LAVIRERYLHTATNYFITSLAVADCLVGLVVMPFSALYEVLENTWFFGTDWCDIWRSLDVLFSTA 195
            :||...|.|....|||:.|||.:|..|.:.|||...:..:....|..|...|..:.:.|:|..|:
 Worm    80 VAVFSYRPLKKVQNYFLVSLAASDLAVAIFVMPLHVVTFLAGGKWLLGVTVCQFFTTADILLCTS 144

  Fly   196 SILNLCVISLDRYWAITDPFSYPMRMTVKRAAGLIAAVWICSSAISFPAIVWWRAARDGEMPAYK 260
            ||||||.|:|||||||.:|.:|..:.|.|....:|..|||.|..||.|.|:.|...::..|.. .
 Worm   145 SILNLCAIALDRYWAIHNPINYAQKRTTKFVCIVIVIVWILSMLISVPPIIGWNNWQENMMED-S 208

  Fly   261 CTFTEHLGYLVFSSTISFYLPLLVMVFTYCRIY-------------------------------- 293
            |..:....::|||:..||:|||||||..|.:|:                                
 Worm   209 CGLSTEKAFVVFSAAGSFFLPLLVMVVVYVKIFISARQRIRTNRGRSALMRIQNAEGDDDYRKMS 273

  Fly   294 --RAAVIQTR-SLKIGTK-QVLMASGELQL-TLRIHRGGTTRDQQNQVSGGGGGGGGGGGGGGSL 353
              ||:|...| |.::|.| .:::|.|:..: ||..|                      ...||||
 Worm   274 IKRASVESARTSSRVGEKTPLVIADGQTTVTTLAAH----------------------STDGGSL 316

  Fly   354 SHSHSHSHHHHHNHGGGTTTSTPEEPDDE----PLSALHNNGLARHRHMGKNFSLSRKLAKFAKE 414
            ....:..|..:||: |.......:..:||    |.:.|.                .|:....|||
 Worm   317 PKDETTKHMKYHNN-GSCKVKVKDVKEDEGNPNPTAVLR----------------KREKISVAKE 364

  Fly   415 KKAAKTLGIVMGVFIICWLPFFVVNLLSGFCIECIEHEEIVSAIVTWLGWINSCMNPVIYACWSR 479
            |:||||:.:::.||..|||||||..::..||..|..|.::..|. ||||:|||.:||.:|...:.
 Worm   365 KRAAKTIAVIIFVFSFCWLPFFVAYVIRPFCETCKLHAKVEQAF-TWLGYINSSLNPFLYGILNL 428

  Fly   480 DFRRAFVRLLC---MCCPRKIRRKYQP 503
            :|||||.::||   :...|:.|...||
 Worm   429 EFRRAFKKILCPKAVLEQRRRRMSAQP 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tmA_Dop1R2-like 122..485 CDD:320195 131/403 (33%)
TM helix 2 143..169 CDD:320195 11/25 (44%)
TM helix 3 182..212 CDD:320195 17/29 (59%)
TM helix 4 224..246 CDD:320195 9/21 (43%)
TM helix 5 266..295 CDD:320195 14/62 (23%)
TM helix 6 297..442 CDD:320195 40/151 (26%)
TM helix 7 453..478 CDD:320195 11/24 (46%)
ser-2NP_001024339.1 7tmA_tyramine_octopamine_R-like 58..434 CDD:320188 133/421 (32%)
TM helix 1 59..85 CDD:320188 10/26 (38%)
TM helix 2 92..118 CDD:320188 11/25 (44%)
TM helix 3 131..161 CDD:320188 17/29 (59%)
TM helix 4 173..196 CDD:320188 10/22 (45%)
TM helix 5 214..243 CDD:320188 14/28 (50%)
TM helix 6 362..392 CDD:320188 17/29 (59%)
TM helix 7 402..427 CDD:320188 11/25 (44%)

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