DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R2 and ser-7

DIOPT Version :9

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:NP_741730.1 Gene:ser-7 / 180565 WormBaseID:WBGene00004780 Length:435 Species:Caenorhabditis elegans


Alignment Length:508 Identity:146/508 - (28%)
Similarity:215/508 - (42%) Gaps:117/508 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 ATSATLSPAMVATGGGGTTTPEPDLSEFLEALPNDRVGLLAF----------LFLFSFATVFGNS 127
            |.:..:||....|....|:...||      .|..|||.|.:|          :......|..||:
 Worm     2 ARAVNISPFASYTVVPITSAWPPD------DLKADRVQLASFTTGKALLAIAILAMIIMTTVGNA 60

  Fly   128 LVILAVIRERYLHTATNYFITSLAVADCLVGLVVMPFSALYEVLENTWFFGTDWCDIWRSLDVLF 192
            ||.|||:..|.|....|:.:.||||||..|||||||. ||.::|.:.|..|:..|.::.:.|:..
 Worm    61 LVCLAVLLVRKLKHPQNFLLVSLAVADFFVGLVVMPL-ALIDLLFDKWPLGSTMCSVYTTSDLTL 124

  Fly   193 STASILNLCVISLDRYWAITDPFSYPMRMTVKRAAGLIAAVWICSSAISFPAIVWWRAARDGEMP 257
            .||||:|||.||:|||..|:.|..|..:.|.||....||.|||.::.:|..:.:......||   
 Worm   125 CTASIVNLCAISVDRYLVISSPLRYSAKRTTKRIMMYIACVWIIAAIVSISSHIIANLLNDG--- 186

  Fly   258 AY-----KCTFTEHLGYLVFSSTISFYLPLLVMVFTYCRIYRAAVIQTRSLKIGTKQVLMASGEL 317
            .|     .|....|..|..:::.||||.|..:||....:|:|||            :.|.|...|
 Worm   187 TYVDDTGTCQVIPHFIYQSYATIISFYAPTFIMVILNIKIWRAA------------KRLAAQDRL 239

  Fly   318 QLTLRIHRGGTTRDQQNQVSGGGGGGGGGGGGGGSLSHSHSHSHHHHHNHGGGTTTS--TPEEPD 380
                                               :||.:|........:|...|..  ..:|..
 Worm   240 -----------------------------------MSHCNSVDASERPRNGSAETKDFLNEKETI 269

  Fly   381 DEPLSALHNNGLARHRHMGKNFSLSRKLAKFAKEK------------KAAKTLGIVMGVFIICWL 433
            |.|.....|:..:|...:.:.: |.|..|.|:..|            ||.||||::|.|||||||
 Worm   270 DVPKKERANSTNSRLFKLERKY-LHRPSAFFSAAKGPLIRQTEKSECKARKTLGVIMSVFIICWL 333

  Fly   434 PFFVVNLLSGFCIECIEHEEIVSAIVTWLGWINSCMNPVIYACWSRDFRRAFVRLL-CMCC---- 493
            |||::.:...|.:..   .:.:..:..|||:.||.:||:||..::::||..|..:| |.|.    
 Worm   334 PFFILAIFKSFGMWI---PDWLDLLALWLGYSNSTLNPLIYCKYNKEFRIPFREMLACRCATLQT 395

  Fly   494 ---PRKIRRKYQPTMRSKSQCHVAAAMVAASTSFGYHSVNQIDRTLMXRQLSS 543
               .:....:|.|.:|.::|          |:|:         |.|:.|:..|
 Worm   396 VMRQQSFTSRYGPPVRYRTQ----------SSSY---------RPLLSRRNDS 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tm_4 123..>295 CDD:304433 68/176 (39%)
7tm_1 125..474 CDD:278431 114/367 (31%)
ser-7NP_741730.1 7tmA_5-HT7 42..382 CDD:320452 119/394 (30%)
TM helix 1 44..68 CDD:320452 8/23 (35%)
TM helix 2 77..99 CDD:320452 14/22 (64%)
TM helix 3 115..137 CDD:320452 9/21 (43%)
TM helix 4 160..176 CDD:320452 6/15 (40%)
TM helix 5 201..224 CDD:320452 8/22 (36%)
TM helix 6 315..340 CDD:320452 17/24 (71%)
TM helix 7 350..375 CDD:320452 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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