DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R2 and Htr1f

DIOPT Version :10

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:NP_032336.1 Gene:Htr1f / 15557 MGIID:99842 Length:366 Species:Mus musculus


Alignment Length:403 Identity:140/403 - (34%)
Similarity:202/403 - (50%) Gaps:67/403 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 EFLEALPNDRVGLLAFLFLFSFA--TVFGNSLVILAVIRERYLHTATNYFITSLAVADCLVGLVV 161
            |.|..:|:.   :|..|.|...|  |...|||||.|:|..|.||...||.|.||||.|.||.::|
Mouse    15 ELLNRMPSK---ILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLV 76

  Fly   162 MPFSALYEVLENTWFFGTDWCDIWRSLDVLFSTASILNLCVISLDRYWAITDPFSYPMRMTVKRA 226
            ||||.:| ::..:|..|...||||.|:|::..|.|||:|..|:||||.||||...|..:.|.:.|
Mouse    77 MPFSIVY-IVRESWIMGQVLCDIWLSVDIICCTCSILHLSAIALDRYRAITDAVEYARKRTPRHA 140

  Fly   227 AGLIAAVWICSSAISFPAIVWWR--AARDGEMPAYKCTFT-EHLGYLVFSSTISFYLPLLVMVFT 288
            ..:|..||:.|..||.|.:.|..  .:||.|     |... :|:...::|:..:||:||::::..
Mouse   141 GIMITIVWVISVFISMPPLFWRHQGTSRDDE-----CVIKHDHIVSTIYSTFGAFYIPLVLILIL 200

  Fly   289 YCRIYRAAVI------QTRSLKIGTK-QVLMASGELQLTLRIHRGGTTRDQQNQVSGGGGGGGGG 346
            |.:|||||..      .:|.:|.... ||.:.|||..:.|     .:|.....:           
Mouse   201 YYKIYRAARTLYHKRQASRMIKEELNGQVFLESGEKSIKL-----VSTSYMLEK----------- 249

  Fly   347 GGGGGSLSHSHSHSHHHHHNHGGGTTTSTPEEPDDEPLSALHNNGLARHRHMGKNFSLSRKLAKF 411
                 |||...:.....|         ||.:.|..|   ..|.....|.:..|            
Mouse   250 -----SLSDPSTDFDRIH---------STVKSPRSE---LKHEKSWRRQKISG------------ 285

  Fly   412 AKEKKAAKTLGIVMGVFIICWLPFFVVNLLSGFCIECIEHEEIVSAIVTWLGWINSCMNPVIYAC 476
            .:|:|||.|||:::|.|:||||||||..|:...|.:|...|| :|..:.|||::||.:||:||..
Mouse   286 TRERKAATTLGLILGAFVICWLPFFVKELVVNVCEKCKISEE-MSNFLAWLGYLNSLINPLIYTI 349

  Fly   477 WSRDFRRAFVRLL 489
            ::.||::||.:|:
Mouse   350 FNEDFKKAFQKLV 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tmA_Dop1R2-like 122..485 CDD:320195 130/372 (35%)
TM helix 2 143..169 CDD:320195 15/25 (60%)
TM helix 3 182..212 CDD:320195 17/29 (59%)
TM helix 4 224..246 CDD:320195 8/21 (38%)
TM helix 5 266..295 CDD:320195 9/28 (32%)
TM helix 6 297..442 CDD:320195 38/151 (25%)
TM helix 7 453..478 CDD:320195 11/24 (46%)
Htr1fNP_032336.1 7tmA_5-HT1F 24..359 CDD:320456 135/386 (35%)
TM helix 1 25..51 CDD:320456 12/25 (48%)
TM helix 2 58..84 CDD:320456 16/26 (62%)
TM helix 3 96..126 CDD:320456 17/29 (59%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 120..122 1/1 (100%)
TM helix 4 138..160 CDD:320456 8/21 (38%)
TM helix 5 178..207 CDD:320456 9/28 (32%)
TM helix 6 286..316 CDD:320456 18/29 (62%)
TM helix 7 326..351 CDD:320456 12/25 (48%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 343..347 2/3 (67%)

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