DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dop1R2 and LOC116411706

DIOPT Version :10

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:XP_031760361.1 Gene:LOC116411706 / 116411706 XenbaseID:XB-GENE-29097575 Length:402 Species:Xenopus tropicalis


Alignment Length:443 Identity:118/443 - (26%)
Similarity:196/443 - (44%) Gaps:93/443 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 NATT-SATSATLSPAMVATGGGGTTTPEPDLSEFLEALPNDRVGLLAFLFLFSFATVFGNSLVIL 131
            |.|. :.|:.:|...|      ||.:|:..:           :.|:..:......||.||:||||
 Frog    19 NVTNINQTNTSLVDVM------GTQSPQITM-----------IILVTVISCLILVTVLGNTLVIL 66

  Fly   132 AVIRERYLHTATNYFITSLAVADCLVGLVVMPFSALYEVLENTWFFGTDWCDIWRSLDVLFSTAS 196
            |.|.:|.|...:|:|:.:||:.|..:|...:||...| |....|..|...|.:|..:|.|..|||
 Frog    67 AFIEDRRLRNRSNFFLLNLAICDFFIGAFCIPFYVPY-VFTGKWLLGKFLCKLWLIVDNLMCTAS 130

  Fly   197 ILNLCVISLDRYWAITDPFSYPMRMTVKRAAGL----IAAVWICSSAISFPAIVWWRAARDGE-- 255
            ..|:.:||.||:.::|   ...:..::::..|.    :|.|||.:|.:..|||::|... ||:  
 Frog   131 AFNVVLISYDRFLSVT---MAVLHRSIEKEHGRTVLNMALVWILASLLYSPAIIFWEYV-DGDKS 191

  Fly   256 ------MPAYKCTFTEHLGYLVFSSTISFYLPLLVMVF----TYCRIYRAAVIQTRSLKIGTKQV 310
                  :|.|...:.    :|:.:||..|.||||.:.|    .||.      |::||.|   ||.
 Frog   192 IPTDLCLPGYFYAWY----FLLGASTFDFLLPLLSISFFNLSLYCN------IRSRSRK---KQH 243

  Fly   311 LMASGELQLTLRIHRGGTTRDQQNQVSGGGGGGGGGGGGGGSLSHSHSHSHHHHHNHGGGTTTST 375
            ::.| .:...|                            .|:.:..:..|.:..|| |.....:|
 Frog   244 IVTS-PIDSNL----------------------------DGNPARPYIISGNDFHN-GAVKDLNT 278

  Fly   376 PE-EPDDEPLSALHNNGLARHRHMGKNFSLSRKLAKFAKEKKAAKTLGIVMGVFIICWLPFFVVN 439
            |: :.....|....:|.|..||.. :....:..:.|.:::||.||:|.:::.||.:||.|:.::.
 Frog   279 PQYKKGKRSLCCFFSNVLPLHRDQ-QTVRYNVHVIKLSRDKKIAKSLSVLVCVFGMCWAPYSLLM 342

  Fly   440 LLSGFCIECIEHEEIVSA----IVTWLGWINSCMNPVIYACWSRDFRRAFVRL 488
            .:...|     |:..:.:    |..||.||||.:||.:|......||:||.::
 Frog   343 TIRAAC-----HDNCIDSYWYDITFWLLWINSSVNPFLYPLCHESFRKAFAKV 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tmA_Dop1R2-like 122..485 CDD:320195 107/383 (28%)
TM helix 2 143..169 CDD:320195 8/25 (32%)
TM helix 3 182..212 CDD:320195 12/29 (41%)
TM helix 4 224..246 CDD:320195 8/25 (32%)
TM helix 5 266..295 CDD:320195 11/32 (34%)
TM helix 6 297..442 CDD:320195 31/145 (21%)
TM helix 7 453..478 CDD:320195 10/28 (36%)
LOC116411706XP_031760361.1 7tmA_Histamine_H3R_H4R 44..387 CDD:320176 108/396 (27%)
TM helix 1 45..71 CDD:320176 11/25 (44%)
TM helix 2 78..105 CDD:320176 9/27 (33%)
TM helix 3 116..146 CDD:320176 12/29 (41%)
TM helix 4 161..179 CDD:320176 5/17 (29%)
TM helix 5 204..234 CDD:320176 11/39 (28%)
TM helix 6 315..345 CDD:320176 10/29 (34%)
TM helix 7 355..380 CDD:320176 10/24 (42%)

Return to query results.
Submit another query.