DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R2 and htr1e

DIOPT Version :9

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:XP_002933964.1 Gene:htr1e / 100380026 XenbaseID:XB-GENE-965113 Length:362 Species:Xenopus tropicalis


Alignment Length:376 Identity:129/376 - (34%)
Similarity:192/376 - (51%) Gaps:46/376 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 LFLFSFATVFGNSLVILAVIRERYLHTATNYFITSLAVADCLVGLVVMPFSALYEVLENTWFFGT 179
            |.:.:..|...||.||||:...:.||...||.|.||||.|.||.::|||.|..|.|:: ||..|.
 Frog    26 LAIITILTTVLNSAVILAICTTKKLHQPANYLICSLAVTDFLVAILVMPLSITYIVMD-TWTLGY 89

  Fly   180 DWCDIWRSLDVLFSTASILNLCVISLDRYWAITDPFSYPMRMTVKRAAGLIAAVWICSSAISFPA 244
            ..|:||.|:|:...|.|||:||||:|||||||||...|..:.|||||..:|..||..|..||.|.
 Frog    90 VICEIWLSVDMTCCTCSILHLCVIALDRYWAITDAIEYARKRTVKRAGIMILTVWTISVFISIPP 154

  Fly   245 IVWWRAARDGEMPAYKCTFT-EHLGYLVFSSTISFYLPLLVMVFTYCRIYRAAVIQTRSLKIGTK 308
            : :||...:..:|: ||... :||.|.::|:..:||:||.:::..|.|||.||           |
 Frog   155 L-FWRNHHNINIPS-KCIIQHDHLIYTIYSTCGAFYIPLTLILILYYRIYHAA-----------K 206

  Fly   309 QVLMASGELQLTLRIHRGGTTRDQQNQVSGGGGGGGGGGGGGGSLSHSHSHSHHHHHNHGGGTTT 373
            .:....|..:     |....:.|.||                 |.:|.................|
 Frog   207 NLYQKRGSSR-----HLSNRSNDSQN-----------------SFAHCKLTQTFCVSEFSTSDPT 249

  Fly   374 STPEEPDDEPLSALHNNGLARHRHMGKNFSLSRKLAKFAKEKKAAKTLGIVMGVFIICWLPFFVV 438
            :..|:.:....:..::|.:.......:..|.||       |:|||:.||:::|.||:.|||||:.
 Frog   250 TEFEKMNASVRTPPYDNDIDIFGDRQQQISSSR-------ERKAARILGLILGAFILSWLPFFIK 307

  Fly   439 NLLSGFCIECIEHEEIVSAIVTWLGWINSCMNPVIYACWSRDFRRAFVRLL 489
            .|:.|..:..:..|  |:..:||||::||.:||::|..::.||:.||.:|:
 Frog   308 ELVVGIQLCTVSPE--VADFLTWLGYVNSLVNPLLYTSFNDDFKLAFKKLI 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tm_4 123..>295 CDD:304433 79/172 (46%)
7tm_1 125..474 CDD:278431 121/349 (35%)
htr1eXP_002933964.1 7tmA_5-HT1E 20..352 CDD:320457 126/370 (34%)
TM helix 1 21..47 CDD:320457 8/20 (40%)
TM helix 2 54..80 CDD:320457 14/25 (56%)
TM helix 3 92..122 CDD:320457 19/29 (66%)
TM helix 4 134..156 CDD:320457 10/22 (45%)
TM helix 5 175..204 CDD:320457 12/28 (43%)
TM helix 6 281..311 CDD:320457 17/36 (47%)
TM helix 7 320..345 CDD:320457 11/26 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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