DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dop1R2 and adra1ba

DIOPT Version :10

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:XP_001922013.4 Gene:adra1ba / 100149100 ZFINID:ZDB-GENE-120510-1 Length:486 Species:Danio rerio


Alignment Length:536 Identity:180/536 - (33%)
Similarity:264/536 - (49%) Gaps:97/536 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 LPTSTELVLNATTSATSATLSPAMVATGGGGTTTPEPDLSEFLEALPNDRVGLLAFLFLFSFATV 123
            :.:.|:...|..::|:|.....:..::.|.||......||   .|||   :|::...|:. ||.|
Zfish     1 MSSDTDHAANFLSNASSELSDVSNSSSSGNGTAPSSFSLS---RALP---LGMVLGAFIV-FAIV 58

  Fly   124 FGNSLVILAVIRERYLHTATNYFITSLAVADCLVGLVVMPFSALYEVLENTWFFGTDWCDIWRSL 188
             ||.||||:|:..|:|...|||||.:||:||.|:...|:|.||..|:| |.|.||..:||||.::
Zfish    59 -GNILVILSVVCNRHLRIPTNYFIINLAMADLLLSTTVLPVSATREIL-NYWVFGRIFCDIWAAV 121

  Fly   189 DVLFSTASILNLCVISLDRYWAITDPFSYPMRMTVKRAAGLIAAVWICSSAISFPAIVWWRAARD 253
            |||..||||::|||||:|||..:..|..||..:|.|||...:..||:.:..||...::.|:    
Zfish   122 DVLCCTASIMSLCVISIDRYIGVRYPLQYPSIVTEKRALLAMLGVWVLAFVISIGPLLGWK---- 182

  Fly   254 GEMPAYK---CTFTEHLGYLVFSSTISFYLPLLVMVFTYCRIYRAAVIQTRSLKIGTKQVLMASG 315
             |.|:..   |..||...|.:|||..|||:||.|::..|||:|..|...|::|:.|..:..|.|.
Zfish   183 -EPPSEDDTVCLITEEPFYALFSSLGSFYIPLAVILAMYCRVYIVAKRTTKNLEAGVMKEHMDSN 246

  Fly   316 ELQLTLRIHRGGTTRDQQNQVSGGGGGGGGGGGGGGSLSHSHSHSHHHHHNHGGGTTTSTPEEPD 380
            |  ||||||..| ::.|::...|                  |..|                    
Zfish   247 E--LTLRIHYKG-SQTQEDCTKG------------------HLRS-------------------- 270

  Fly   381 DEPLSALHNNGLARHRHMGKNFSLSRKLAKFAKEKKAAKTLGIVMGVFIICWLPFFVVNLLSGFC 445
                                  ||:.||.||::|||||||||:|:|:||:||||||:...:..|.
Zfish   271 ----------------------SLTVKLLKFSREKKAAKTLGVVVGMFILCWLPFFLALPIGSFN 313

  Fly   446 IECIEHEEIVSAIVTWLGWINSCMNPVIYACWSRDFRRAFVRLL-CMCCPRKIR--RKYQPTMRS 507
            .. :...|....::.|||:.|||:||:||.|:||:|::||:|:| |.|..:|.:  |.|...:.:
Zfish   314 TS-LRPPETFFKVIFWLGYFNSCLNPIIYPCYSREFKQAFIRILRCQCQQKKQQGWRAYNYRVPN 377

  Fly   508 KSQCHVAAAMVAASTSFGYHSVNQIDRTLMXRQLSS------------CSTCSGGSNCGGSRSAH 560
            .:..:...:.:..:.|....:.:|...||..|.:.|            | |.|..|:..||....
Zfish   378 ANHVYSDTSSICMNGSLQTLAPSQPSPTLFSRVVGSRPASGLLPGWGPC-TSSSSSSLSGSPFPG 441

  Fly   561 HQHHSSGTATPSSSQR 576
            .....|...:|..|.|
Zfish   442 MMRSGSQATSPCKSNR 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tmA_Dop1R2-like 122..485 CDD:320195 139/365 (38%)
TM helix 2 143..169 CDD:320195 14/25 (56%)
TM helix 3 182..212 CDD:320195 19/29 (66%)
TM helix 4 224..246 CDD:320195 7/21 (33%)
TM helix 5 266..295 CDD:320195 14/28 (50%)
TM helix 6 297..442 CDD:320195 42/144 (29%)
TM helix 7 453..478 CDD:320195 12/24 (50%)
adra1baXP_001922013.4 None

Return to query results.
Submit another query.