DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1907 and GC2

DIOPT Version :9

Sequence 1:NP_651703.1 Gene:CG1907 / 43483 FlyBaseID:FBgn0039674 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster


Alignment Length:296 Identity:84/296 - (28%)
Similarity:140/296 - (47%) Gaps:35/296 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QEAPKKAVATNAI-KFLFGGLSGMGATMVVQPLDLVKTRMQISGAG-SGKKEYRSSLHCIQTIVS 69
            |:.|:|   .|.. |.:.||::|:.....|.|||:||||:|....| :|::.|.|...|.:..::
  Fly    12 QKKPQK---FNVFPKIINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIA 73

  Fly    70 KEGPLALYQGIGAALLRQATYTTGRLGMYTYLNDLFREKFQRSPGITDSMAMGTIAGA-CGAF-- 131
            .||...:|:|....::    ..|....:....||.||.......|:. .::..|:||. .|.|  
  Fly    74 SEGYFGMYRGSAVNIV----LITPEKAIKLTANDFFRYHLASDDGVI-PLSRATLAGGLAGLFQI 133

  Fly   132 -IGTPAEVALVRMTSDGRLPVAERRNYTNVANALA-----RITREEGLTALWRGSLPTVGRAMVV 190
             :.||.|:..::|...||:..|:|.....|....|     .:.||.|:..|::|    ||...|.
  Fly   134 VVTTPMELLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKG----VGATGVR 194

  Fly   191 NMTQLASYSQFKTYFR-HGPLQMEEGIKLHFCASMLSGLLTTITS----MPLDIAKTRIQNMKMV 250
            ::|....|.....:.. .||.:.:...:..|..|:::|||:.:||    .|.|:.|||:|    .
  Fly   195 DITFSMVYFPLMAWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQ----A 255

  Fly   251 DGKPEYRGTADVLLRVARQEGVFALWKGFTPYYCRL 286
            ||:.:::|..|.:.|..::||:.|.:||   ..||:
  Fly   256 DGEKKFKGIMDCVNRTLKEEGISAFFKG---GLCRI 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1907NP_651703.1 Mito_carr 16..109 CDD:278578 28/94 (30%)
Mito_carr 118..207 CDD:278578 25/98 (26%)
Mito_carr 219..307 CDD:278578 25/72 (35%)
GC2NP_731657.2 PTZ00169 14..289 CDD:240302 83/294 (28%)
Mito_carr 16..106 CDD:278578 27/96 (28%)
Mito_carr 123..203 CDD:278578 23/83 (28%)
Mito_carr 228..302 CDD:278578 24/68 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442047
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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