DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1907 and GC1

DIOPT Version :10

Sequence 1:NP_651703.1 Gene:CG1907 / 43483 FlyBaseID:FBgn0039674 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster


Alignment Length:332 Identity:95/332 - (28%)
Similarity:153/332 - (46%) Gaps:42/332 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SATSVQEAPKKAVATNAI--KFLFGGLSGMGATMVVQPLDLVKTRMQISGAG-SGKKEYRSSLHC 63
            |||.....|:......|:  |.:.||::|:.....|.||||||||:|....| :|::.|.|...|
  Fly     4 SATIATPLPQPQHQQFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDC 68

  Fly    64 IQTIVSKEGPLALYQGIGAALLRQATYTTGRLGMYTYLNDLFREKFQRSPG---ITDSMAMGTIA 125
            .:.....||...:|:|.|..:|    ..|....:....||.||.|.....|   :|..|..|.:|
  Fly    69 FRKTYKAEGYFGMYRGSGVNIL----LITPEKAIKLTANDYFRHKLTTKDGKLPLTSQMVAGGLA 129

  Fly   126 GACGAFIGTPAEVALVRMTSDGRLPVA--------ERRNYTNVANALARITREEGLTALWRGSLP 182
            ||....:.||.|:..::|...||:..|        |:.:.|.:|   :::.:::|:..|::|   
  Fly   130 GAFQIIVTTPMELLKIQMQDAGRVAAAAKLAGKTVEKVSATQLA---SQLIKDKGIFGLYKG--- 188

  Fly   183 TVGRAMVVNMT-QLASYSQFKTYFRHGPLQMEEGIKLHFCASMLSGLLTTITSM----PLDIAKT 242
             :|...:.::| .:..:..|.|....||.:.:...:..|..|.|:||....|:.    |.|:.||
  Fly   189 -IGATGLRDVTFSIIYFPLFATLNDLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKT 252

  Fly   243 RIQNMKMVDGKPEYRGTADVLLRVARQEGVFALWKGFTPYYCR---LGP-----HTVLTFIILEQ 299
            |:|.:|..||:.|::|.:|.:.:..:.||..|.:||   ..||   :.|     .||....:.|.
  Fly   253 RLQAIKKADGEKEFKGISDCITKTLKHEGPTAFFKG---GLCRMIVIAPLFGIAQTVYYLGVAEG 314

  Fly   300 LNQGYNK 306
            | .||.|
  Fly   315 L-LGYQK 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1907NP_651703.1 Mito_carr 16..109 CDD:395101 31/95 (33%)
Mito_carr 118..207 CDD:395101 22/97 (23%)
Mito_carr 219..307 CDD:395101 33/100 (33%)
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 78/270 (29%)

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