DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1907 and CG18327

DIOPT Version :9

Sequence 1:NP_651703.1 Gene:CG1907 / 43483 FlyBaseID:FBgn0039674 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001260966.1 Gene:CG18327 / 36567 FlyBaseID:FBgn0033904 Length:304 Species:Drosophila melanogaster


Alignment Length:306 Identity:91/306 - (29%)
Similarity:156/306 - (50%) Gaps:26/306 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FLFGGLSGMGATMVVQPLDLVKTRMQISG----AGSGKKEYRSSLHCIQTIVSKEGPLALYQGIG 81
            |:.||::.|||.:...|::::|||:|:.|    .||..:.|:|......|:...:|.|.|.:|:.
  Fly     6 FVLGGVAAMGAGVFTNPVEVIKTRIQLQGELAARGSHAQPYKSVFQAFVTVAKNDGILGLQKGLA 70

  Fly    82 AALLRQATYTTGRLGMYTYLND---LFREKFQRSPGITDSMAMGTIAGACGAFIGTPAEVALVRM 143
            .||..|....:.||.:||:..:   :...|.:.|  ....|..|.:.|..|::..:|..:...::
  Fly    71 PALCFQFVINSFRLSIYTHAVEKGWVHNNKGEIS--FAKGMFWGALGGVVGSYCASPFFLIKTQL 133

  Fly   144 TSDG--RLPVAERRNYTNVANALARITREEGLTALWRGSLPTVGRAMVVNMTQLASYSQFKTYFR 206
            .:..  ::.|..:..:.::::|:.:|.|:.|:..||||||..|.||.|.:..|:|.:.|.|:   
  Fly   134 QAQAAKQIAVGYQHQHASMSDAIRKIYRKNGVFGLWRGSLANVSRATVASAVQIAVFGQAKS--- 195

  Fly   207 HGPLQMEEGIKLH-----FCASMLSGLLTTITSMPLDIAKTRIQNMKMVDGKPE---YRGTADVL 263
               |..|.|:..|     ||:.:.:|...::...|||:..||:.| :.||.:..   |||..|.:
  Fly   196 ---LLKENGVVTHPTILSFCSGLAAGSFVSLAITPLDVVTTRLYN-QGVDAQGRGIYYRGWLDCV 256

  Fly   264 LRVARQEGVFALWKGFTPYYCRLGPHTVLTFIILEQLNQGYNKYVL 309
            |.:.|.|||:.|:|||.|.|.|..|::.|..:..::|.....||.|
  Fly   257 LTILRSEGVYGLYKGFWPIYLRSAPYSTLVLLFFDELIALREKYDL 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1907NP_651703.1 Mito_carr 16..109 CDD:278578 28/94 (30%)
Mito_carr 118..207 CDD:278578 24/90 (27%)
Mito_carr 219..307 CDD:278578 31/95 (33%)
CG18327NP_001260966.1 Mito_carr 4..87 CDD:278578 26/80 (33%)
PTZ00169 5..293 CDD:240302 87/295 (29%)
Mito_carr 101..201 CDD:278578 27/107 (25%)
Mito_carr 204..296 CDD:278578 31/92 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441334
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R857
SonicParanoid 00.000 Not matched by this tool.
32.870

Return to query results.
Submit another query.