DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1907 and colt

DIOPT Version :10

Sequence 1:NP_651703.1 Gene:CG1907 / 43483 FlyBaseID:FBgn0039674 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster


Alignment Length:331 Identity:82/331 - (24%)
Similarity:133/331 - (40%) Gaps:57/331 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSATSVQEAPKKAVATNAIK-FLFGGLSGMGATMVVQPLDLVKTRMQ-ISGAGSGKKE-YRSSLH 62
            |:.|......:||   |.:| ||.||..|:...:...|||.:|.|:| :.....|::. ||.:..
  Fly     1 MTTTENVSTERKA---NPVKSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFD 62

  Fly    63 CIQTIVSKEGPLALYQGIGAAL--------LRQATYTTGRL-------GMYTYLNDLFREKFQRS 112
            |....:..||...||:|:.|.|        :..|.|..|:.       ...||            
  Fly    63 CAAKTIKNEGVRGLYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTY------------ 115

  Fly   113 PGITDSMAMGTIAGACGAFIGTPAE-VALVRMTSDGRLPVAERRNYTNVANALARITREEGLTAL 176
            |.|   ...|:.:|.....|..|.| :.::..|..|:   ...|.|..:.:...::.:|.||.::
  Fly   116 PQI---FVAGSFSGLFSTLIMAPGERIKVLLQTQQGQ---GGERKYNGMIDCAGKLYKEGGLRSV 174

  Fly   177 WRGSLPTVGRAMVVNMTQLASYSQF----KTYFRHGPLQMEEGIKLHFCASMLSGLLTTITSMPL 237
            ::||..|:.|.:..|......|...    |:....|.:.....|    .|..::|:...|..||.
  Fly   175 FKGSCATMLRDLPANGLYFLVYEALQDVAKSKSETGQISTASTI----FAGGVAGMAYWILGMPA 235

  Fly   238 DIAKTRIQNMKMVDGKPE--YR-GTADVLLRVARQEGVFALWKGFTPYYCRLGPHTVLTFIILEQ 299
            |:.|:|:|:      .||  |: |...|...:..::|..||::|.||...|..|.....|..:|.
  Fly   236 DVLKSRLQS------APEGTYKHGIRSVFKDLIVKDGPLALYRGVTPIMLRAFPANAACFFGIEL 294

  Fly   300 LNQGYN 305
            .|:.:|
  Fly   295 ANKFFN 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1907NP_651703.1 Mito_carr 16..109 CDD:395101 29/110 (26%)
Mito_carr 118..207 CDD:395101 19/93 (20%)
Mito_carr 219..307 CDD:395101 26/90 (29%)
coltNP_477221.1 Mito_carr 12..107 CDD:395101 29/97 (30%)
Mito_carr 112..202 CDD:395101 22/107 (21%)
Mito_carr 210..299 CDD:395101 27/98 (28%)

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