DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7568 and AT2G05720

DIOPT Version :10

Sequence 1:NP_001263071.1 Gene:CG7568 / 43482 FlyBaseID:FBgn0039673 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_178635.1 Gene:AT2G05720 / 815121 AraportID:AT2G05720 Length:276 Species:Arabidopsis thaliana


Alignment Length:243 Identity:62/243 - (25%)
Similarity:99/243 - (40%) Gaps:44/243 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 GSGNNLTTFSIIFSDKI-VTGSFDGTAKVWSATS-GQSLCTFYGHTAELVAAEFHPVDGKSIATA 243
            |....||..|:....|| ||.|..|..|:|.... ...:....||...:....|..||.:.:|||
plant    61 GDDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATA 125

  Fly   244 SLDGSARIYDVETSHELQQLTHHGAEVIAARFNRDGQMLLT----GSFDHSAAIWDVRSKSLGHQ 304
            |.|.:.:|:                       ..||.:|.|    ..||..|.:||:|:......
plant   126 STDRTEKIW-----------------------KTDGTLLQTFKASSGFDSLARVWDLRTARNILI 167

  Fly   305 LRGHSAELSNCVWNFSGSLIATGSLDNTARIWDTRKLDQELYLAARHSDEVLDVSFDAAGQ-LLA 368
            .:||..::.:..::.:|..:|:|..||..||||.| :.:.||:...|.:.|..|.::...: .||
plant   168 FQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLR-MRKLLYIIPAHVNLVSQVKYEPQERYFLA 231

  Fly   369 TCSSDCTARVWRLEGSSELEMLSLMAGHSDEV----------SKVCFS 406
            |.|.|....:|   ...:..::..:.||..:|          |:.||:
plant   232 TASHDMNVNIW---SGRDFSLVKSLVGHESKVASLDIAVDSSSRKCFA 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7568NP_001263071.1 WD40 117..467 CDD:441893 62/243 (26%)
WD40 repeat 122..158 CDD:293791
WD40 repeat 189..222 CDD:293791 9/34 (26%)
WD40 repeat 228..265 CDD:293791 9/36 (25%)
WD40 repeat 270..306 CDD:293791 10/39 (26%)
WD40 repeat 314..348 CDD:293791 12/33 (36%)
WD40 repeat 355..393 CDD:293791 8/38 (21%)
WD40 repeat 400..436 CDD:293791 4/17 (24%)
WD40 repeat 442..466 CDD:293791
AT2G05720NP_178635.1 WD40 <61..268 CDD:441893 59/233 (25%)
WD40 repeat 66..104 CDD:293791 11/37 (30%)
WD40 repeat 110..145 CDD:293791 13/57 (23%)
WD40 repeat 176..211 CDD:293791 12/35 (34%)
WD40 repeat 217..254 CDD:293791 8/39 (21%)
Blue background indicates that the domain is not in the aligned region.

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