DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7568 and Wdr38

DIOPT Version :9

Sequence 1:NP_001263071.1 Gene:CG7568 / 43482 FlyBaseID:FBgn0039673 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_083963.1 Gene:Wdr38 / 76646 MGIID:1923896 Length:303 Species:Mus musculus


Alignment Length:264 Identity:79/264 - (29%)
Similarity:131/264 - (49%) Gaps:7/264 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 IVTGSFDGTAKVWSATSGQSLCTFYGHTAELVAAEFHPVDGKSIATASLDGSARIYDVETSHELQ 261
            ::|.|.||...||...||:.|....||...:.:..|.| ||:.||::|.|.|.|::||..|..|.
Mouse    41 LLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP-DGRLIASSSSDHSIRLWDVARSKCLH 104

  Fly   262 QLTHHGAEVIAARFNRDGQMLLTGSFDHSAAIWDVRSKSLGHQLRGHSAELSNCVWNFSGSLIAT 326
            .|..|...|....|:.|.:.|.:|.:|..|.:|:|:|....|.|.||...:.:..::.:...:||
Mouse   105 VLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLAT 169

  Fly   327 GSLDNTARIWDTRKLDQ--ELYLAARHSDEVLDVSFDAAGQLLATCSSDCTARVWRLEGSSELEM 389
            ||.|:|..|||.|....  ..:....|:..:..:.:.|:| |||:.|.|.|..||: ..::.|.:
Mouse   170 GSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWK-PTTNNLPL 232

  Fly   390 LSLMAGHSDEVSKVCFSPSGCMLLTASADNTARLWLTESGQCSQVLAGHEGEVFSCAYSYAGDAI 454
              .:.||:..|:.:.|||....|.:|....|.::|...:|:|.:.|.|......:|.::..|..:
Mouse   233 --QLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLL 295

  Fly   455 LTAS 458
            ::.:
Mouse   296 VSGA 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7568NP_001263071.1 WD40 93..466 CDD:225201 79/264 (30%)
WD40 repeat 122..158 CDD:293791
WD40 154..467 CDD:238121 79/264 (30%)
WD40 repeat 189..222 CDD:293791 9/24 (38%)
WD40 repeat 228..265 CDD:293791 15/36 (42%)
WD40 repeat 270..306 CDD:293791 11/35 (31%)
WD40 repeat 314..348 CDD:293791 10/35 (29%)
WD40 repeat 355..393 CDD:293791 11/37 (30%)
WD40 repeat 400..436 CDD:293791 10/35 (29%)
WD40 repeat 442..466 CDD:293791 2/17 (12%)
Wdr38NP_083963.1 WD40 <18..300 CDD:225201 79/264 (30%)
WD 1 24..63 9/21 (43%)
WD40 25..300 CDD:238121 79/264 (30%)
WD40 repeat 31..66 CDD:293791 9/24 (38%)
WD 2 66..105 16/39 (41%)
WD40 repeat 72..108 CDD:293791 15/36 (42%)
WD 3 108..147 11/38 (29%)
WD40 repeat 113..149 CDD:293791 11/35 (31%)
WD 4 150..189 12/38 (32%)
WD40 repeat 156..194 CDD:293791 10/37 (27%)
WD 5 195..233 12/41 (29%)
WD40 repeat 200..235 CDD:293791 11/38 (29%)
WD 6 236..277 12/40 (30%)
WD 7 279..303 2/21 (10%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D872177at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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