DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7568 and btrc

DIOPT Version :9

Sequence 1:NP_001263071.1 Gene:CG7568 / 43482 FlyBaseID:FBgn0039673 Length:482 Species:Drosophila melanogaster
Sequence 2:XP_012822030.1 Gene:btrc / 549140 XenbaseID:XB-GENE-486122 Length:610 Species:Xenopus tropicalis


Alignment Length:274 Identity:76/274 - (27%)
Similarity:118/274 - (43%) Gaps:60/274 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 KIVTGSFDGTAKVWSATSGQSLCTFYGHTAELVAAEFHPVDGKSIATASLDGSARIYDVETSHEL 260
            |||:|..|.|.|:|...:.:......|||..::..::   |.:.|.|.|.|.:.|::||.|...|
 Frog   320 KIVSGLRDNTIKIWDKNTLECKRVLMGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTGEML 381

  Fly   261 QQLTHHGAEVIAARFNRDGQMLLTGSFDHSAAIWDVRSK---SLGHQLRGHSAELSNCVWNFSGS 322
            ..|.||...|:..|||..  |::|.|.|.|.|:||:.|.   :|...|.||.|.::  |.:|...
 Frog   382 NTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN--VVDFDDK 442

  Fly   323 LIATGSLDNTARIWDTRKLDQELYLAARHSDEVLDVSFDAAGQLLATCSSDCTARVWRLEGSSEL 387
            .|.:.|.|.|.::|:|                             :||                 
 Frog   443 YIVSASGDRTIKVWNT-----------------------------STC----------------- 461

  Fly   388 EMLSLMAGHSDEVSKVCFSPSGCMLLTASADNTARLWLTESGQCSQVLAGHEGEVFSCAYSYAGD 452
            |.:..:.||...::  |......::::.|:|||.|||..|.|.|.:||.||| |:..| ..:...
 Frog   462 EFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRC-IRFDNK 522

  Fly   453 AILTASKDNSCRFW 466
            .|::.:.|...:.|
 Frog   523 RIVSGAYDGKIKVW 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7568NP_001263071.1 WD40 93..466 CDD:225201 75/272 (28%)
WD40 repeat 122..158 CDD:293791
WD40 154..467 CDD:238121 76/274 (28%)
WD40 repeat 189..222 CDD:293791 8/25 (32%)
WD40 repeat 228..265 CDD:293791 11/36 (31%)
WD40 repeat 270..306 CDD:293791 14/38 (37%)
WD40 repeat 314..348 CDD:293791 8/33 (24%)
WD40 repeat 355..393 CDD:293791 3/37 (8%)
WD40 repeat 400..436 CDD:293791 12/35 (34%)
WD40 repeat 442..466 CDD:293791 3/23 (13%)
btrcXP_012822030.1 Beta-TrCP_D 144..182 CDD:288940
F-box-like 186..233 CDD:289689
WD40 <295..591 CDD:225201 76/274 (28%)
WD40 308..586 CDD:238121 76/274 (28%)
WD40 repeat 311..346 CDD:293791 8/25 (32%)
WD40 repeat 352..386 CDD:293791 11/36 (31%)
WD40 repeat 391..428 CDD:293791 14/38 (37%)
WD40 repeat 435..468 CDD:293791 11/80 (14%)
WD40 repeat 474..508 CDD:293791 12/35 (34%)
WD40 repeat 514..557 CDD:293791 4/24 (17%)
WD40 repeat 563..585 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R947
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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