DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7568 and fbxw11b

DIOPT Version :9

Sequence 1:NP_001263071.1 Gene:CG7568 / 43482 FlyBaseID:FBgn0039673 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_998669.2 Gene:fbxw11b / 406825 ZFINID:ZDB-GENE-040426-2903 Length:531 Species:Danio rerio


Alignment Length:289 Identity:76/289 - (26%)
Similarity:124/289 - (42%) Gaps:61/289 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 SGNNLTTFSIIFSD-KIVTGSFDGTAKVWSATSGQSLCTFYGHTAELVAAEFHPVDGKSIATASL 245
            |.|:...:.:.:.| ||::|..|.:.|:|...:.:.|....|||..::..::   |.:.|.|.|.
Zfish   226 SENSKGVYCLQYDDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQY---DERVIVTGSS 287

  Fly   246 DGSARIYDVETSHELQQLTHHGAEVIAARFNRDGQMLLTGSFDHSAAIWDVRSK---SLGHQLRG 307
            |.:.|::||.:...|..|.||...|:..||...  :::|.|.|.|.|:||:.|.   ||...|.|
Zfish   288 DSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNG--LMVTCSKDRSIAVWDMASPTDISLRRVLVG 350

  Fly   308 HSAELSNCVWNFSGSLIATGSLDNTARIWDTRKLDQELYLAARHSDEVLDVSFDAAGQLLATCSS 372
            |.|.::  |.:|....|.:.|.|.|.::|.|                             :||  
Zfish   351 HRAAVN--VVDFDDKYIVSASGDRTIKVWST-----------------------------STC-- 382

  Fly   373 DCTARVWRLEGSSELEMLSLMAGHSDEVSKVCFSPSGCMLLTASADNTARLWLTESGQCSQVLAG 437
                           |.:..:.||...::  |......::::.|:|||.|||..|.|.|.:||.|
Zfish   383 ---------------EFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG 430

  Fly   438 HEGEVFSCAYSYAGDAILTASKDNSCRFW 466
            || |:..| ..:....|::.:.|...:.|
Zfish   431 HE-ELVRC-IRFDNKRIVSGAYDGKIKVW 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7568NP_001263071.1 WD40 93..466 CDD:225201 75/287 (26%)
WD40 repeat 122..158 CDD:293791
WD40 154..467 CDD:238121 76/289 (26%)
WD40 repeat 189..222 CDD:293791 8/33 (24%)
WD40 repeat 228..265 CDD:293791 10/36 (28%)
WD40 repeat 270..306 CDD:293791 13/38 (34%)
WD40 repeat 314..348 CDD:293791 8/33 (24%)
WD40 repeat 355..393 CDD:293791 3/37 (8%)
WD40 repeat 400..436 CDD:293791 12/35 (34%)
WD40 repeat 442..466 CDD:293791 3/23 (13%)
fbxw11bNP_998669.2 Beta-TrCP_D 67..105 CDD:288940
F-box-like 109..156 CDD:289689
WD40 <216..510 CDD:225201 76/289 (26%)
WD40 229..507 CDD:238121 74/286 (26%)
WD40 repeat 232..267 CDD:293791 8/34 (24%)
WD40 repeat 273..307 CDD:293791 10/36 (28%)
WD40 repeat 312..349 CDD:293791 13/38 (34%)
WD40 repeat 356..389 CDD:293791 11/80 (14%)
WD40 repeat 395..429 CDD:293791 12/35 (34%)
WD40 repeat 435..478 CDD:293791 4/24 (17%)
WD40 repeat 484..506 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R947
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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