DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7568 and Wdr88

DIOPT Version :9

Sequence 1:NP_001263071.1 Gene:CG7568 / 43482 FlyBaseID:FBgn0039673 Length:482 Species:Drosophila melanogaster
Sequence 2:XP_036009101.1 Gene:Wdr88 / 384605 MGIID:2686275 Length:667 Species:Mus musculus


Alignment Length:446 Identity:104/446 - (23%)
Similarity:169/446 - (37%) Gaps:83/446 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LDSKTNIEP-----LADRILLQ-TLAEAEEEQSPADLEK-------SPPPRPVSGSVARSQNAFS 87
            :|||....|     ..||.:.| |...|::.:.|..|.:       |.|      .:.|..|..|
Mouse   188 VDSKNRFSPKKMDFSEDREISQPTFLRAQQSKVPWALMRALGLFKLSLP------DIRRYYNLTS 246

  Fly    88 ALKQALEK---LQKKLREPVKKKFYLHKCHNSHILPLTNVSFDRSGERCLTGSYDRTCHVINTQT 149
            ....||:|   .::|......|||:      .:..||:.:.:                       
Mouse   247 HDPLALDKDRQPREKSHMATVKKFW------GNQQPLSKIPY----------------------- 282

  Fly   150 AQVEHILSGHDNVVFSVGFNFPHWLVYLQSGGSGNNLTTFSIIFSDKIVTGSFDGTAKVWSATSG 214
                .||.|||::|.|..|..              |.|.|        ::.|:|.:.|:|.|..|
Mouse   283 ----KILIGHDHIVSSCHFCM--------------NDTRF--------LSSSYDCSVKLWDAEDG 321

  Fly   215 QSLCTFYGHTAELVAAEFHPVDGKSIATASLDGSARIYDVETSHELQQLTHHGAEVIAARFNRDG 279
            ..:..|.......|.......|.:.|..:|.|.:.|.:||||...|.:: .|...|:..:|:.:|
Mouse   322 TVIWDFEPRPKAPVLECSITADNRRIVASSYDKTVRAWDVETGQLLWKV-RHDTFVVCCKFSPNG 385

  Fly   280 QMLLTG-SFDHSAAIWDVRS-KSLGHQLRGHSAELSNCVWNFSGSLIATGSLDNTARIWDTRKLD 342
            :.:|:. ..|....:.|..: .::.|....|...:::|.::.....:|:.|:|...:|||.....
Mouse   386 KFVLSALDVDRGIYLMDPENITTVIHMKDHHQRSITSCCFDPDSQKVASVSMDRCIKIWDITSRT 450

  Fly   343 QELYLAARHSDEVLDVSFDAAGQLLATCSSDCTARVWRL---EGSSELEMLSLMAGHSDEVSKVC 404
            ....:...|.:.:.|..|.:.|..|.|.|.|...::|.:   |..:....::||.||...||..|
Mouse   451 TLFTIPKAHYNAISDCCFTSTGHFLCTSSWDKNIKIWNVHTGEFRNRGACVTLMKGHEGCVSSCC 515

  Fly   405 FSPSGCMLLTASADNTARLWLTESGQCSQVLAGHEGEVFSCAYSYAGDAILTASKD 460
            .:.....|::...|.|..:|....|.....|.|||..|...|.|.....||:|||:
Mouse   516 IARDSSFLISGGFDKTVAIWDVGGGYRKLALKGHEDWVTDVAISNNKKWILSASKE 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7568NP_001263071.1 WD40 93..466 CDD:225201 87/376 (23%)
WD40 repeat 122..158 CDD:293791 2/35 (6%)
WD40 154..467 CDD:238121 79/312 (25%)
WD40 repeat 189..222 CDD:293791 8/32 (25%)
WD40 repeat 228..265 CDD:293791 11/36 (31%)
WD40 repeat 270..306 CDD:293791 7/37 (19%)
WD40 repeat 314..348 CDD:293791 7/33 (21%)
WD40 repeat 355..393 CDD:293791 9/40 (23%)
WD40 repeat 400..436 CDD:293791 8/35 (23%)
WD40 repeat 442..466 CDD:293791 8/19 (42%)
Wdr88XP_036009101.1 WD40 281..569 CDD:238121 76/337 (23%)
WD40 repeat 292..330 CDD:293791 13/59 (22%)
WD40 repeat 336..371 CDD:293791 10/35 (29%)
WD40 repeat 376..413 CDD:293791 7/36 (19%)
WD40 repeat 421..456 CDD:293791 7/34 (21%)
WD40 repeat 463..505 CDD:293791 10/41 (24%)
WD40 repeat 511..537 CDD:293791 7/25 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D872177at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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