DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7568 and Daw1

DIOPT Version :9

Sequence 1:NP_001263071.1 Gene:CG7568 / 43482 FlyBaseID:FBgn0039673 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_001020196.1 Gene:Daw1 / 363267 RGDID:1561436 Length:415 Species:Rattus norvegicus


Alignment Length:468 Identity:182/468 - (38%)
Similarity:272/468 - (58%) Gaps:54/468 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSATKIFLRYYPPGLAVNYKTTKGNE-RLRHFDLLDLDSKTNIEPLADRILLQTLAEAEEEQSPA 64
            |....:.|||||||:.:.|:  ||.| :.:..|||:|...|::..|.                 .
  Rat     1 MKLKSLLLRYYPPGIMLEYE--KGGELKTKSIDLLELSPSTDVNTLV-----------------G 46

  Fly    65 DLEKSPPPRPVSGSVARSQNAFSALKQALEKLQKKLREPVKKKFYLHKCHNSHILPLTNVSFDRS 129
            :::|..|....|.:        ..::..:::||:|||:.....|||.|...:||||||||:.:::
  Rat    47 EIQKVEPLITASRT--------KQVRLLVQRLQEKLRQHCDHNFYLFKVLRAHILPLTNVALNKA 103

  Fly   130 GERCLTGSYDRTCHVINTQTAQVEHILSGHDNVVFSVGFNFPHWLVYLQSGGSGNNLTTFSIIFS 194
            |...:||||||||.|.:|.:.:..|.|.||.|||:::.||.|                     :.
  Rat   104 GSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNP---------------------YG 147

  Fly   195 DKIVTGSFDGTAKVWSATSGQSLCTFYGHTAELVAAEFHPVDGKSIATASLDGSARIYDVETSHE 259
            |||.|||||.|.|:|||.:|:...||.|||||:|...|:| ....:||.|:|.:|:::|:::..|
  Rat   148 DKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNP-QSTVVATGSMDTTAKLWDIQSGEE 211

  Fly   260 LQQLTHHGAEVIAARFNRDGQMLLTGSFDHSAAIWDVRSKSLGHQLRGHSAELSNCVWNFSGSLI 324
            :..||.|.||:|:..|:..|..::||||||:..:||..:....|.|.||.||:|:.::::..|||
  Rat   212 VVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLI 276

  Fly   325 ATGSLDNTARIWDTRKLDQELYLAARHSDEVLDVSFDAAGQLLATCSSDCTARVWRLEGSSELEM 389
            .|||:|.|..:||... .:.:.....|.||:||..||..|:|:||.|:|.||||:   .::..:.
  Rat   277 LTGSMDKTCMLWDATS-GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVY---NATTRKC 337

  Fly   390 LSLMAGHSDEVSKVCFSPSGCMLLTASADNTARLWLTESGQCSQVLAGHEGEVFSCAYSYAGDAI 454
            ::.:.||..|:||:.|:|.|..|||.|:|.|||:|..::|||.|||.||..|:||||::|.|:.:
  Rat   338 ITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIV 402

  Fly   455 LTASKDNSCRFWR 467
            :|.|||||||.||
  Rat   403 ITGSKDNSCRIWR 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7568NP_001263071.1 WD40 93..466 CDD:225201 159/372 (43%)
WD40 repeat 122..158 CDD:293791 16/35 (46%)
WD40 154..467 CDD:238121 131/312 (42%)
WD40 repeat 189..222 CDD:293791 16/32 (50%)
WD40 repeat 228..265 CDD:293791 11/36 (31%)
WD40 repeat 270..306 CDD:293791 12/35 (34%)
WD40 repeat 314..348 CDD:293791 10/33 (30%)
WD40 repeat 355..393 CDD:293791 14/37 (38%)
WD40 repeat 400..436 CDD:293791 19/35 (54%)
WD40 repeat 442..466 CDD:293791 14/23 (61%)
Daw1NP_001020196.1 WD40 86..120 CDD:197651 19/33 (58%)
WD 1 90..129 19/38 (50%)
WD40 repeat 96..132 CDD:293791 16/35 (46%)
WD40 126..415 CDD:238121 131/314 (42%)
WD 2 132..174 23/62 (37%)
WD40 repeat 137..175 CDD:293791 20/58 (34%)
WD 3 175..214 15/39 (38%)
WD40 repeat 181..217 CDD:293791 11/36 (31%)
WD 4 217..256 14/38 (37%)
WD40 repeat 222..258 CDD:293791 12/35 (34%)
WD 5 259..298 15/39 (38%)
WD40 repeat 265..300 CDD:293791 11/35 (31%)
WD 6 301..340 17/41 (41%)
WD40 repeat 306..342 CDD:293791 14/38 (37%)
WD 7 343..384 22/40 (55%)
WD40 repeat 348..384 CDD:293791 19/35 (54%)
WD 8 386..415 16/28 (57%)
WD40 repeat 390..414 CDD:293791 14/23 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0272
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32687
Inparanoid 1 1.050 340 1.000 Inparanoid score I2289
OMA 1 1.010 - - QHG53955
OrthoDB 1 1.010 - - D258383at33208
OrthoFinder 1 1.000 - - FOG0006855
OrthoInspector 1 1.000 - - oto97202
orthoMCL 1 0.900 - - OOG6_100268
Panther 1 1.100 - - LDO PTHR44156
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4949
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.880

Return to query results.
Submit another query.