DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7568 and fbxw11a

DIOPT Version :9

Sequence 1:NP_001263071.1 Gene:CG7568 / 43482 FlyBaseID:FBgn0039673 Length:482 Species:Drosophila melanogaster
Sequence 2:XP_005173126.1 Gene:fbxw11a / 334373 ZFINID:ZDB-GENE-030131-6305 Length:562 Species:Danio rerio


Alignment Length:275 Identity:75/275 - (27%)
Similarity:118/275 - (42%) Gaps:60/275 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 DKIVTGSFDGTAKVWSATSGQSLCTFYGHTAELVAAEFHPVDGKSIATASLDGSARIYDVETSHE 259
            |||::|..|.:.|:|...|.:.|....|||..::..::   |.:.|.|.|.|.:.|::||.:...
Zfish   271 DKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVSSGEV 332

  Fly   260 LQQLTHHGAEVIAARFNRDGQMLLTGSFDHSAAIWDVRSK---SLGHQLRGHSAELSNCVWNFSG 321
            |..|.||...|:..||...  :::|.|.|.|.|:||:.|.   ||...|.||.|.::  |.:|..
Zfish   333 LNTLIHHNEAVLHLRFCNG--LMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVN--VVDFDD 393

  Fly   322 SLIATGSLDNTARIWDTRKLDQELYLAARHSDEVLDVSFDAAGQLLATCSSDCTARVWRLEGSSE 386
            ..|.:.|.|.|.::|.|                             :||                
Zfish   394 KYIVSASGDRTIKVWST-----------------------------STC---------------- 413

  Fly   387 LEMLSLMAGHSDEVSKVCFSPSGCMLLTASADNTARLWLTESGQCSQVLAGHEGEVFSCAYSYAG 451
             |.:..:.||...::  |......::::.|:|||.|||..|.|.|.:||.||| |:..| ..:..
Zfish   414 -EFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRC-IRFDN 473

  Fly   452 DAILTASKDNSCRFW 466
            ..|::.:.|...:.|
Zfish   474 KRIVSGAYDGKIKVW 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7568NP_001263071.1 WD40 93..466 CDD:225201 74/273 (27%)
WD40 repeat 122..158 CDD:293791
WD40 154..467 CDD:238121 75/275 (27%)
WD40 repeat 189..222 CDD:293791 9/26 (35%)
WD40 repeat 228..265 CDD:293791 10/36 (28%)
WD40 repeat 270..306 CDD:293791 13/38 (34%)
WD40 repeat 314..348 CDD:293791 8/33 (24%)
WD40 repeat 355..393 CDD:293791 3/37 (8%)
WD40 repeat 400..436 CDD:293791 12/35 (34%)
WD40 repeat 442..466 CDD:293791 3/23 (13%)
fbxw11aXP_005173126.1 Beta-TrCP_D 98..136 CDD:288940
F-box-like 140..187 CDD:289689
WD40 <247..541 CDD:225201 75/275 (27%)
WD40 260..538 CDD:238121 75/275 (27%)
WD40 repeat 263..298 CDD:293791 9/26 (35%)
WD40 repeat 304..338 CDD:293791 10/36 (28%)
WD40 repeat 343..380 CDD:293791 13/38 (34%)
WD40 repeat 387..420 CDD:293791 11/80 (14%)
WD40 repeat 426..460 CDD:293791 12/35 (34%)
WD40 repeat 466..509 CDD:293791 4/24 (17%)
WD40 repeat 515..537 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R947
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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