| Sequence 1: | NP_001263071.1 | Gene: | CG7568 / 43482 | FlyBaseID: | FBgn0039673 | Length: | 482 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001100129.1 | Gene: | Prpf4 / 298095 | RGDID: | 1311303 | Length: | 521 | Species: | Rattus norvegicus |
| Alignment Length: | 491 | Identity: | 127/491 - (25%) |
|---|---|---|---|
| Similarity: | 210/491 - (42%) | Gaps: | 82/491 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 24 GNERLRHFDLLDLDSKTNIEPLADRILLQTLAEAEEEQSPADLEKSPPPRPVSGSV--------- 79
Fly 80 ---------ARSQNAFSAL-KQALEKLQ------KKLREPVKKKFYLHKCHNS---HILPLTNVS 125
Fly 126 FDRSGERC----LTGSYDRTCHVINTQTAQVEHI---LSGHDNVVFSVGFNFP----HWLVYLQS 179
Fly 180 GGSGNNLTTFSIIFSDKIVTGSFDGTAKVWSATSGQSLCTFYGHTAELVAAEFHP-----VDGK- 238
Fly 239 -SIATASLDGSARIYDVETSHELQQLTHHGAEVIAARFNRDGQMLLTGSFDHSAAIWDVRS-KSL 301
Fly 302 GHQLRGHSAELSNCVWNFSGSLIATGSLDNTARIWDTRKLDQELYLAARHSDEVLDVSFDAAGQL 366
Fly 367 LATCSSDCTARVWRLEGSSELEMLSLMAGHSDEVSKVCFSP-SGCMLLTASADNTARLWLTESGQ 430
Fly 431 CSQVLAGHEGEVFSCAYSYAGDAILTASKDNSCRFW 466 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG7568 | NP_001263071.1 | WD40 | 93..466 | CDD:225201 | 112/401 (28%) |
| WD40 repeat | 122..158 | CDD:293791 | 10/42 (24%) | ||
| WD40 | 154..467 | CDD:238121 | 94/329 (29%) | ||
| WD40 repeat | 189..222 | CDD:293791 | 8/32 (25%) | ||
| WD40 repeat | 228..265 | CDD:293791 | 10/43 (23%) | ||
| WD40 repeat | 270..306 | CDD:293791 | 10/36 (28%) | ||
| WD40 repeat | 314..348 | CDD:293791 | 11/33 (33%) | ||
| WD40 repeat | 355..393 | CDD:293791 | 11/37 (30%) | ||
| WD40 repeat | 400..436 | CDD:293791 | 13/36 (36%) | ||
| WD40 repeat | 442..466 | CDD:293791 | 7/23 (30%) | ||
| Prpf4 | NP_001100129.1 | SFM | 102..140 | CDD:128776 | 4/37 (11%) |
| WD40 | <227..518 | CDD:225201 | 91/312 (29%) | ||
| WD40 | 232..518 | CDD:238121 | 90/307 (29%) | ||
| WD40 repeat | 233..270 | CDD:293791 | 11/53 (21%) | ||
| WD40 repeat | 284..320 | CDD:293791 | 6/35 (17%) | ||
| WD40 repeat | 325..361 | CDD:293791 | 10/36 (28%) | ||
| WD40 repeat | 368..403 | CDD:293791 | 11/34 (32%) | ||
| WD40 repeat | 409..443 | CDD:293791 | 11/36 (31%) | ||
| WD40 repeat | 451..488 | CDD:293791 | 13/36 (36%) | ||
| WD40 repeat | 494..518 | CDD:293791 | 7/23 (30%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG0272 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||