DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7568 and pop2

DIOPT Version :9

Sequence 1:NP_001263071.1 Gene:CG7568 / 43482 FlyBaseID:FBgn0039673 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_594956.1 Gene:pop2 / 2543514 PomBaseID:SPAC4D7.03 Length:703 Species:Schizosaccharomyces pombe


Alignment Length:537 Identity:112/537 - (20%)
Similarity:208/537 - (38%) Gaps:149/537 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 YPPGLAVNYKTT--KGNERLRHFDLLDLDSKTNIEPLADRILLQTLAEAEEEQSPADLEKSPPPR 73
            :||...|:...|  .|::.:.. ||.||:.::         ::||.     |..|..::      
pombe   164 FPPSPKVDTSNTVSPGSKPISE-DLEDLNLQS---------IVQTF-----EDLPEGIQ------ 207

  Fly    74 PVSGSVARSQNAFSALKQALEKLQKKLREPVKKKFYLHKCH----NSHILPLTNVSFDRSGERCL 134
                |.|..|...|..:|::..|..:. ||:.||..|....    .|.:|.|...||  ...|.:
pombe   208 ----SYAFFQLLRSCNRQSMRLLLNEC-EPLLKKDILSNLPFSIVQSILLNLDIHSF--LSCRLV 265

  Fly   135 TGSYDRTCHVINTQTAQVEHILS------------------------GHDNV-------VFSVGF 168
            :.:::|   :::..|:..:|:.|                        .:|.:       :|...|
pombe   266 SPTWNR---ILDVHTSYWKHMFSLFGFQINENDWKYANPNLNRPPFLHNDQISDDYFPEIFKRHF 327

  Fly   169 -NFPHWL------------VYLQSGGSGNNLTTFSIIFSDKIVTGSFDGTAKVWSATSGQSLCTF 220
             |...||            :::.     |.:.|..::..|:|:|.|..||.::.:|.:|......
pombe   328 LNRKRWLFPSIPPSHLSFPIHVP-----NFMITSLLLHKDRIITTSGSGTIQIHNAITGVLEARL 387

  Fly   221 YGHTAELVAAEFHPVDGKSIATASLDGSARIYDVETSH---------------EL---QQLTHHG 267
            .||...:.|.:.|.   .::.:.|:|.:.|::::|.:.               |:   .:|..||
pombe   388 EGHKEGVWAVKIHE---NTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHG 449

  Fly   268 AEVIAARFNRDGQMLLTGSFDHSAAIWDVRSKSLGHQLRGHSAELSNCVWNFSGSLIATGSLDNT 332
            .|::    ..|...:::||.||:..:|.:...:....|..:                 |.|:|. 
pombe   450 VEIV----EPDQPYIVSGSRDHTLRVWKLPKNTDPPYLPDN-----------------TNSIDR- 492

  Fly   333 ARIWDTRKLDQELYLAARHSDEVLDVSFDAAGQLLATCSSDCTARVWRLEGSSELEMLSLMAGHS 397
               |:  |....::....|:|.|..:|  ..|.:|.:.|.|.:.|:||:   |..|.|..:.|||
pombe   493 ---WE--KNPYFVHTLIGHTDSVRTIS--GYGDILVSGSYDSSIRIWRV---STGECLYHLRGHS 547

  Fly   398 DEVSKVCFSPSGCMLLTASADNTARLWLTESGQCSQVLAGHEGEVFSCAYSYAGDAILTASKDNS 462
            ..:..|.:.|...:.::.|.|.:.|:|...:|.|..||.||  :.|....:...:.:::.|.|::
pombe   548 LRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGH--DAFVTLLNVFQNRLISGSADST 610

  Fly   463 CRFWRXYDWYTVQLNDG 479
            .|.|        .||.|
pombe   611 IRIW--------DLNTG 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7568NP_001263071.1 WD40 93..466 CDD:225201 90/438 (21%)
WD40 repeat 122..158 CDD:293791 7/59 (12%)
WD40 154..467 CDD:238121 76/374 (20%)
WD40 repeat 189..222 CDD:293791 8/32 (25%)
WD40 repeat 228..265 CDD:293791 8/54 (15%)
WD40 repeat 270..306 CDD:293791 6/35 (17%)
WD40 repeat 314..348 CDD:293791 5/33 (15%)
WD40 repeat 355..393 CDD:293791 12/37 (32%)
WD40 repeat 400..436 CDD:293791 9/35 (26%)
WD40 repeat 442..466 CDD:293791 4/23 (17%)
pop2NP_594956.1 WD40 219..657 CDD:225201 95/457 (21%)
FBOX 242..282 CDD:197608 8/44 (18%)
WD40 360..654 CDD:238121 70/305 (23%)
WD40 repeat 395..429 CDD:293791 6/36 (17%)
WD40 repeat 434..504 CDD:293791 17/96 (18%)
WD40 repeat 509..544 CDD:293791 12/39 (31%)
WD40 repeat 550..586 CDD:293791 9/35 (26%)
WD40 repeat 630..653 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R947
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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