DRSC/TRiP Functional Genomics Resources

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Protein Alignment alph and PTC2

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_011013.1 Gene:PTC2 / 856823 SGDID:S000000891 Length:464 Species:Saccharomyces cerevisiae


Alignment Length:346 Identity:113/346 - (32%)
Similarity:174/346 - (50%) Gaps:31/346 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGFLDKPKTAKHNDEGEGNKLLFGVSSMQGWRSEMEDAYYARAGL-----GDALPDWSFFAVFD 60
            ||..|..|...|.:..|..:...||:.:|||||..|||::.....:     .|.:   :|:.:||
Yeast     1 MGQILSNPVIDKESHSGADSLTAFGLCAMQGWRMSMEDSHILEPNVLTKSDKDHI---AFYGIFD 62

  Fly    61 GHAGCKVSEHCAKHLLESIISTEEFIGGDHVKGIRTGFLRIDEVMRELPEFTRESEKCGGTTAVC 125
            ||.|.||:|:|...::|.:...:.|..|:..:.:...|:..|..:.:.|....:...|   ||..
Yeast    63 GHGGAKVAEYCGNKIVEILQEQKSFHEGNLPRALIDTFINTDVKLLQDPVMKEDHSGC---TATS 124

  Fly   126 AFVGLTQ--VYIANCGDSRAVLCRQGVPVFATQDHKPILPEEKERIYNAGGSVMIKRVNGTLAVS 188
            ..|..:|  :...|.||||.||...|.....:.||||.|..||.||..|.|.|.:.||||.||:|
Yeast   125 ILVSKSQNLLVCGNAGDSRTVLATDGNAKALSYDHKPTLASEKSRIVAADGFVEMDRVNGNLALS 189

  Fly   189 RALGDYDFKNVKEKGQCEQLVSPEPEIFCQSRQ-DSDEFLVLACDGIWDVMSNEDVCSFIHSRMR 252
            ||:||::||:..:.|..||:|:..|:|...|.. |.|||::||||||||.::::|....:|..:|
Yeast   190 RAIGDFEFKSNPKLGPEEQIVTCVPDILEHSLDYDRDEFVILACDGIWDCLTSQDCVDLVHLGLR 254

  Fly   253 VTSNLVSIANQVVDTCLHKGSR------DNMSIIIIAFPGAPKPTEEAIEAEHRLEKQIEKITRD 311
            ....|..|:::::|.|....:.      |||||:::|.   .|..|:..:...|::   .|..|.
Yeast   255 EGKTLNEISSRIIDVCCAPTTEGTGIGCDNMSIVVVAL---LKEGEDVAQWSDRMK---SKAHRT 313

  Fly   312 EIES-----SKITDYVDLLKC 327
            .:.|     .::..|.|..||
Yeast   314 SVRSFADKRRRVFSYYDFSKC 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 96/273 (35%)
PP2C_C 278..352 CDD:285117 13/55 (24%)
PTC2NP_011013.1 PP2C 23..279 CDD:395385 91/261 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1497
OMA 1 1.010 - - QHG53745
OrthoFinder 1 1.000 - - FOG0000692
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100270
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R955
SonicParanoid 1 1.000 - - X444
TreeFam 00.000 Not matched by this tool.
87.700

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