DRSC/TRiP Functional Genomics Resources

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Protein Alignment alph and PTC5

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_014733.1 Gene:PTC5 / 854257 SGDID:S000005616 Length:572 Species:Saccharomyces cerevisiae


Alignment Length:435 Identity:95/435 - (21%)
Similarity:163/435 - (37%) Gaps:132/435 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NDEGEGNKLLFGVSSMQGWRSEMEDAYYARAGLG------DALP--------------------- 51
            ||:   :.|:...|.::....:.|::::...|.|      ..||                     
Yeast   120 NDQ---SVLILNDSKIEAKLHDREESHFVNRGTGIFRYDVAQLPSNHPIEDDHVEQIITIPIESE 181

  Fly    52 -------DWSFFAVFDGHAGCKVSEHCAKHLLESII----------------STEEFIGGDHVKG 93
                   |..||.:||||.|...||..:|.|:..:.                ...:.|.    ..
Yeast   182 DGKSIEKDLYFFGIFDGHGGPFTSEKLSKDLVRYVAYQLGQVYDQNKTVFHSDPNQLID----SA 242

  Fly    94 IRTGFLRID-----EVMREL---PEFTRESEKCGGTTAVCAFVGL-----TQVYIANCGDSRAVL 145
            |..|||::|     |..|:|   |..|..:......:..||.:.|     :.:.:|..|||||::
Yeast   243 ISKGFLKLDNDLVIESFRKLFQDPNNTNIANTLPAISGSCALLSLYNSTNSILKVAVTGDSRALI 307

  Fly   146 C---RQG---VPVFATQDHKPILPEEKE-RIYNAGGSVMIK--RVNGTLAVSRALGDYDFKNVKE 201
            |   .:|   |...:|......|.|.:. |..:.|...:|:  |:.|:|..|||.|||.:| :||
Yeast   308 CGLDNEGNWTVKSLSTDQTGDNLDEVRRIRKEHPGEPNVIRNGRILGSLQPSRAFGDYRYK-IKE 371

  Fly   202 KG----------------------QCEQLVSPEPEIFCQSRQDSDEFLVLACDGIWDVMSNEDVC 244
            ..                      :....|:.||.|......::.:|:|:..||::::::||::.
Yeast   372 VDGKPLSDLPEVAKLYFRREPRDFKTPPYVTAEPVITSAKIGENTKFMVMGSDGLFELLTNEEIA 436

  Fly   245 SFIHSRMRVTSNLVSIANQ------VVDTCLHKGS-------RDNMSIIIIAFPGAPKPTEEAIE 296
            |.:...|....||..:..:      |:|....|.:       :||.|    :.|....| |..||
Yeast   437 SLVIRWMDKNMNLAPVKAEPGKLPKVIDVSEDKEAQRPAFRYKDNNS----SSPSGSNP-EYLIE 496

  Fly   297 AEHRLEKQI-EKITRDEIESSKITDYVDLLKCLQN------RDDI 334
                 :|.: ..:.|:.:.:....:||..|..:.:      |||:
Yeast   497 -----DKNVATHLIRNALSAGGRKEYVSALVSIPSPMSRRYRDDL 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 79/366 (22%)
PP2C_C 278..352 CDD:285117 14/64 (22%)
PTC5NP_014733.1 PP2C 182..464 CDD:395385 68/286 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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