DRSC/TRiP Functional Genomics Resources

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Protein Alignment alph and PTC4

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_009683.1 Gene:PTC4 / 852422 SGDID:S000000329 Length:393 Species:Saccharomyces cerevisiae


Alignment Length:394 Identity:108/394 - (27%)
Similarity:153/394 - (38%) Gaps:140/394 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGFLDKP---KTAKHNDEGEGNKLLFG--------VSSMQGWRSEMEDAY-------------- 40
            ||..|..|   ||.::| |.:.|:...|        |.||||:|...|||:              
Yeast     1 MGQLLSHPLTEKTIEYN-EYKNNQASTGIVPRFYNCVGSMQGYRLTQEDAHLIRNENSVVYVRFF 64

  Fly    41 ------YARAGLGDALPDWSFFAVFDGHAGCKVSEHCAKHLLESIISTEEFIGGDH--------- 90
                  |....|       :.|||||||.|    :.|:|.|          .||.|         
Yeast    65 NPFIDKYETLSL-------NVFAVFDGHGG----DDCSKFL----------SGGRHHRDGNGSSN 108

  Fly    91 ---------VKGIRTGF------------------------------------LRIDEVMRELPE 110
                     :|.|...|                                    |:.:|:.|   .
Yeast   109 GNGEPNAGLIKWIAYSFENHHYTSTTNNDSSKFKRSFNTLEGLVSQIFKDAFILQDEELYR---H 170

  Fly   111 FTRESEKCGGTTAVCAFVGLTQVYIANCGDSRAVLCRQ--GVPVFATQDHKPILPEEKERIYNAG 173
            |...|  ||.|..|...:....:|:|||||||.:|..:  |:...:. ||||....|..||.:.|
Yeast   171 FANSS--CGSTAVVACIINEESLYVANCGDSRCILSSKSNGIKTMSF-DHKPQHIGELIRINDNG 232

  Fly   174 GSVMIKRVNGTLAVSRALGDYDFK-------------NVKEK-----GQCEQLVSPEPEIFCQSR 220
            |:|.:.||.|.||:|||..|:.||             |:.:.     ...|..|:.||::.....
Yeast   233 GTVSLGRVGGVLALSRAFSDFQFKRGVTYPHRRTKLTNITQNLTYGTPPQEAQVTVEPDVLMHKI 297

  Fly   221 QDS-DEFLVLACDGIWDVMSNEDVCSFIHSRMRVTSNLVSIANQVVDTCLHKGSR------DNMS 278
            ..| |||||||||||||:.:|:.:..||...:...:.|.:|..:::|..:.:.:.      |||:
Yeast   298 DYSKDEFLVLACDGIWDIYNNKQLIHFIKYHLVSGTKLDTIITKLLDHGIAQANSNTGVGFDNMT 362

  Fly   279 IIII 282
            .||:
Yeast   363 AIIV 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 99/368 (27%)
PP2C_C 278..352 CDD:285117 2/5 (40%)
PTC4NP_009683.1 PP2C 82..355 CDD:395385 79/292 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53745
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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