DRSC/TRiP Functional Genomics Resources

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Protein Alignment alph and PTC3

DIOPT Version :10

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_009497.2 Gene:PTC3 / 852224 SGDID:S000000152 Length:468 Species:Saccharomyces cerevisiae


Alignment Length:426 Identity:138/426 - (32%)
Similarity:195/426 - (45%) Gaps:65/426 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGFLDKPKTAKHNDEGEGNKLLFGVSSMQGWRSEMEDAYYARAGL---GDALPDWSFFAVFDGH 62
            ||..|..|...|.:..|......||:.:|||||..||||:.....|   .|. ...:|:.:||||
Yeast     1 MGQILSNPIIDKEHHSGTDCLTAFGLCAMQGWRMSMEDAHIVEPNLLAESDE-EHLAFYGIFDGH 64

  Fly    63 AGCKVSEHCAKHLLESIISTEEFIGGDHVKGIRTGFLRIDEVMRELPEFTRESEKCGGTTAVCAF 127
            .|..|:|.|...::..:...|.|..|...:.:...||..|.   ||.:..:..:...|.||....
Yeast    65 GGSSVAEFCGSKMISILKKQESFKSGMLEQCLIDTFLATDV---ELLKDEKLKDDHSGCTATVIL 126

  Fly   128 VG-LTQVYI-ANCGDSRAVLCRQGVPVFATQDHKPILPEEKERIYNAGGSVMIKRVNGTLAVSRA 190
            |. |.::.| ||.||||.||...|.....:.||||.|..||.||..|.|.|.:.||||.||:|||
Yeast   127 VSQLKKLLICANSGDSRTVLSTGGNSKAMSFDHKPTLLSEKSRIVAADGFVEMDRVNGNLALSRA 191

  Fly   191 LGDYDFKNVKEKGQCEQLVSPEPEIFCQS-RQDSDEFLVLACDGIWDVMSNEDVCSFIH---SRM 251
            :||::||:..:.|..||:|:..|:|.|.: ..|.|||::||||||||.:::::....:|   |:.
Yeast   192 IGDFEFKSNTKLGPHEQVVTCVPDIICHNLNYDEDEFVILACDGIWDCLTSQECVDLVHYGISQG 256

  Fly   252 RVTSNLVSIANQVVDTCLH---KGSR---DNMSIIIIAFPGAPKPTEEAIEAEHRLEKQIEKITR 310
            .:|  |..|::::||.|..   :||.   |||||.|:|.   .|..|...:...|:..:...|..
Yeast   257 NMT--LSDISSRIVDVCCSPTTEGSGIGCDNMSISIVAL---LKENESESQWFERMRSKNYNIQT 316

  Fly   311 DEIESSK-ITDYVDL-----------LKCLQNR------------DDIEGLPPGGGLQSKYHVIE 351
            ..::..| |.|:.|.           .|.||:|            ||::.........||....:
Yeast   317 SFVQRRKSIFDFHDFSDDDNEVFAITTKKLQDRLNRSKDNDDMEIDDLDTELGSSATPSKLSGED 381

  Fly   352 RT-----FKQEF-----------PDRPCEGNGISYF 371
            ||     |..|.           |....:|| .|||
Yeast   382 RTGPIDLFSLEALLEAGIQIRQRPSSDSDGN-TSYF 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 105/274 (38%)
PP2C_C 278..355 CDD:429684 22/105 (21%)
PTC3NP_009497.2 PP2C 23..280 CDD:395385 98/262 (37%)

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