DRSC/TRiP Functional Genomics Resources

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Protein Alignment alph and PTC1

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_010278.3 Gene:PTC1 / 851558 SGDID:S000002164 Length:281 Species:Saccharomyces cerevisiae


Alignment Length:271 Identity:96/271 - (35%)
Similarity:132/271 - (48%) Gaps:42/271 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 WRSEMEDAYYARAGLGDALPDWSFFAVFDGHAGCKVSEHCAKHLLESIISTEEFIGGDHVKGIR- 95
            :|..|||.:.........| ||.:|||||||||.:.|:.|.|| |.:||  |:.|..|..:.:| 
Yeast    31 FRRTMEDVHTYVKNFASRL-DWGYFAVFDGHAGIQASKWCGKH-LHTII--EQNILADETRDVRD 91

  Fly    96 ---TGFLRIDEVMRELPEFTRESEKCGGTTAVCAF------------VGLTQ----VYIANCGDS 141
               ..||.|||.:.     |:.....|.|.|||..            :.|.|    :|.||.|||
Yeast    92 VLNDSFLAIDEEIN-----TKLVGNSGCTAAVCVLRWELPDSVSDDSMDLAQHQRKLYTANVGDS 151

  Fly   142 RAVLCRQGVPVFATQDHKPILPEEKERIYNAGGSVMIKRVNGTLAVSRALGDYDFKNVKEKGQCE 206
            |.||.|.|..:..|.|||.....|.:|:..|||.:|..||||.|||:|:|||..|         :
Yeast   152 RIVLFRNGNSIRLTYDHKASDTLEMQRVEQAGGLIMKSRVNGMLAVTRSLGDKFF---------D 207

  Fly   207 QLVSPEPEIFCQSRQDSDEFLVLACDGIWDVMSNEDVCSFIHSRMRVTSNLVSIANQVVDTCLHK 271
            .||...|..........|:||:|||||:|||:.::|.|..|    :..:.....|..:|...|..
Yeast   208 SLVVGSPFTTSVEITSEDKFLILACDGLWDVIDDQDACELI----KDITEPNEAAKVLVRYALEN 268

  Fly   272 GSRDNMSIIII 282
            |:.||::::::
Yeast   269 GTTDNVTVMVV 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 96/271 (35%)
PP2C_C 278..352 CDD:285117 0/5 (0%)
PTC1NP_010278.3 PP2Cc 12..279 CDD:214625 96/269 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53745
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R955
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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