DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alph and ABI2

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_200515.1 Gene:ABI2 / 835809 AraportID:AT5G57050 Length:423 Species:Arabidopsis thaliana


Alignment Length:321 Identity:108/321 - (33%)
Similarity:154/321 - (47%) Gaps:70/321 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LFGVSSMQGWRSEMEDA--------YYARAGLGDAL------PDWS--FFAVFDGHAGCKVSEHC 71
            |:||:|:.|.|.||||:        ..:.:.|.|..      |..|  ||.|:|||.|.:|:.:|
plant   112 LYGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGGSQVANYC 176

  Fly    72 AKH----LLESIISTE-EFIGGD-----HVKGIRTGFLRID---EVMRELPEFTRESEKCGGTTA 123
            .:.    |.|.|:..: ||..||     ..|.:...|:|:|   |.:...||..       |:|:
plant   177 RERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSEIETVAHAPETV-------GSTS 234

  Fly   124 VCAFVGLTQVYIANCGDSRAVLCRQGVPVFATQDHKPILPEEKERIYNAGGSVMI---KRVNGTL 185
            |.|.|..|.:::||||||||||||...|:..:.||||...:|..||..|||.|:.   .||.|.|
plant   235 VVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIRWNGARVFGVL 299

  Fly   186 AVSRALGDYDFKNVKEKGQCEQLVSPEPEIFCQSRQDSDEFLVLACDGIWDVMSNEDVCSFIHSR 250
            |:||::||...|         ..|.|:||:....|...|:.|:||.||:||||:||:||.....|
plant   300 AMSRSIGDRYLK---------PSVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARKR 355

  Fly   251 MRVTSN----------------------LVSIANQVVDTCLHKGSRDNMSIIIIAFPGAPK 289
            :.:...                      .:|.|..:....|.|||:||:|::::...|..|
plant   356 ILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSKMALQKGSKDNISVVVVDLKGIRK 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 105/313 (34%)
PP2C_C 278..352 CDD:285117 3/12 (25%)
ABI2NP_200515.1 PP2Cc 103..409 CDD:214625 106/312 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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