DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alph and TAP38

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_194509.1 Gene:TAP38 / 828893 AraportID:AT4G27800 Length:388 Species:Arabidopsis thaliana


Alignment Length:321 Identity:96/321 - (29%)
Similarity:146/321 - (45%) Gaps:44/321 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GGFLDKPKTAKHNDEGEG----------NKLLFGVSSMQGWRSEMEDAYYARAGLGDALPDWSFF 56
            ||.:..|...:|......          ..:.:|.:|:||:|.||||....|:   ||:..:|:.
plant    28 GGLVVYPTYGRHRCSAIAIDAPSSLTGVTPIRWGYTSVQGFRDEMEDDIVIRS---DAVDSFSYA 89

  Fly    57 AVFDGHAGCK----VSEHCAKHLLESIISTEEFIGGDHV---KGIRTGFLRIDEVMRELPEFTRE 114
            ||||||||..    :.|...|..:.::.:.....|||..   :.:...|..:|..:.:..|...:
plant    90 AVFDGHAGSSSVKFLREELYKECVGALQAGSLLNGGDFAAIKEALIKAFESVDRNLLKWLEANGD 154

  Fly   115 SEKCGGTTAVCAFVGLTQVYIANCGDSRAVLCRQGVPVFATQDHKP-----ILPEEKERIYNAGG 174
            .|...|:||....:.....:||:.|||.|||.|.|.....|..|:|     ...:|.:|:..|||
plant   155 EEDESGSTATVMIIRNDVSFIAHIGDSCAVLSRSGQIEELTDYHRPYGSSRAAIQEVKRVKEAGG 219

  Fly   175 SVMIKRVNGTLAVSRALGDYDFKNVK----EKGQCE---------------QLVSPEPEIFCQSR 220
            .::..|:.|.:|||||.||..||..|    :||..|               .:|...|:||....
plant   220 WIVNGRICGDIAVSRAFGDIRFKTKKNDMLKKGVDEGRWSEKFVSRIEFKGDMVVATPDIFQVPL 284

  Fly   221 QDSDEFLVLACDGIWDVMSNEDVCSFIHSRMRVTSNLVSIANQVVDTCLHKGSRDNMSIII 281
            ....||::||.||:||.|.:.||.|::..::|...|:......:....|.:.|:||:||||
plant   285 TSDVEFIILASDGLWDYMKSSDVVSYVRDQLRKHGNVQLACESLAQVALDRRSQDNISIII 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 92/289 (32%)
PP2C_C 278..352 CDD:285117 4/4 (100%)
TAP38NP_194509.1 PP2Cc 58..348 CDD:238083 92/291 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.