DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alph and AT3G62260

DIOPT Version :10

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_850737.1 Gene:AT3G62260 / 825399 AraportID:AT3G62260 Length:384 Species:Arabidopsis thaliana


Alignment Length:287 Identity:92/287 - (32%)
Similarity:146/287 - (50%) Gaps:24/287 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GWRSEMEDAYY------ARAGLGDALPDWS-FFAVFDGHAGCKVSEHCAKHLLESIISTEEFIGG 88
            |.:..|||.:.      ::.|....||..| |:||||||.|.:.:.:..::.:......|:|...
plant    86 GPKRNMEDEHIRIDDLSSQVGSLFELPKPSAFYAVFDGHGGPEAAAYVRENAIRFFFEDEQFPQT 150

  Fly    89 DHVKGI---------RTGFLRIDEVMRELPEFTRESEKCGGTTAVCAFVGLTQVYIANCGDSRAV 144
            ..|..:         |..||:.|   ..|.|....|:.| ||||:.|.:....:.:||.||.|||
plant   151 SEVSSVYVEEVETSLRNAFLQAD---LALAEDCSISDSC-GTTALTALICGRLLMVANAGDCRAV 211

  Fly   145 LCRQGVPVFATQDHKPILPEEKERIYNAGGSVMIK-RVNGTLAVSRALGDYDFKNVKEKGQCEQL 208
            |||:|..:..::|||||...|:.|:..:||.:... .:|..|||:|||||:|.|  ...|....|
plant   212 LCRKGRAIDMSEDHKPINLLERRRVEESGGFITNDGYLNEVLAVTRALGDWDLK--LPHGSQSPL 274

  Fly   209 VSPEPEIFCQSRQDSDEFLVLACDGIWDVMSNEDVCSFIHSRMRVTSNLVSIANQVVDTCLHKGS 273
            :| ||||...:..:.|||||:.|||||||:::::..|.:...:...::....|.::|...|.:.|
plant   275 IS-EPEIKQITLTEDDEFLVIGCDGIWDVLTSQEAVSIVRRGLNRHNDPTRCARELVMEALGRNS 338

  Fly   274 RDNMSIIIIAFPGAPKPTEEAIEAEHR 300
            .||::.:::.|....:..:..:..|.|
plant   339 FDNLTAVVVCFMTMDRGDKPVVPLEKR 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 89/269 (33%)
PP2C_C 278..355 CDD:429684 3/23 (13%)
AT3G62260NP_850737.1 PLN03145 72..384 CDD:215603 92/287 (32%)

Return to query results.
Submit another query.