DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alph and Ilkap

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_072128.2 Gene:Ilkap / 64538 RGDID:620128 Length:392 Species:Rattus norvegicus


Alignment Length:326 Identity:96/326 - (29%)
Similarity:159/326 - (48%) Gaps:70/326 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PKTAKHNDEG-------EGNKLLFG----VSSMQGWRSEMEDAYYARAGLGDALPDW-------- 53
            |:..|:..|.       :.:.::||    |:..:|.|.||:||:..   |.|...:.        
  Rat    82 PEEEKNGGEELVEKKVCKASSVIFGLKGYVAERKGEREEMQDAHVI---LNDITQECNPPSSLIT 143

  Fly    54 --SFFAVFDGHAGCKVSEHCAKHLLESIISTEEFIGGDHVKGIRT-------GFLRIDEVMRELP 109
              |:|||||||.|.:.|:..|::|.:::|  .:|..||.:...:|       .|...||      
  Rat   144 RVSYFAVFDGHGGIRASKFAAQNLHQNLI--RKFPKGDVISVEKTVKRCLLDTFKHTDE------ 200

  Fly   110 EFTRE--SEKCG---GTTAVCAFVGLTQVYIANCGDSRAVLCR------QGVPVFATQDHKPILP 163
            ||.::  |:|..   |:||.|.......:||||.|||||:|||      :...:..:::|.|...
  Rat   201 EFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQY 265

  Fly   164 EEKERIYNAGGSVMIKRVNGTLAVSRALGDYDFKNVKEKGQCEQLVSPEPEIFCQSRQDSDEFLV 228
            ||:.||..|||:|...||.|.|.|||::||..:|      :|.  |:..|:|.......:|.|::
  Rat   266 EERMRIQKAGGNVRDGRVLGVLEVSRSIGDGQYK------RCG--VTSVPDIRRCQLTPNDRFIL 322

  Fly   229 LACDGIWDVMSNEDVCSFIHS------------RMRVTSNLVSIANQVVDTCLHKGSRDNMSIII 281
            |||||::.|.:.|:..:||.|            :..|.:...:..|::.:..:.:||.||:::::
  Rat   323 LACDGLFKVFTPEEAVNFILSCLEDEKIQTREGKPAVDARYEAACNRLANKAVQRGSADNVTVMV 387

  Fly   282 I 282
            :
  Rat   388 V 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 93/303 (31%)
PP2C_C 278..352 CDD:285117 0/5 (0%)
IlkapNP_072128.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..91 2/8 (25%)
PP2Cc 108..390 CDD:238083 91/300 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53745
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.