DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alph and pdp2

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_571700.1 Gene:pdp2 / 58149 ZFINID:ZDB-GENE-000921-2 Length:530 Species:Danio rerio


Alignment Length:391 Identity:90/391 - (23%)
Similarity:137/391 - (35%) Gaps:128/391 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 FAVFDGHAG--C--KVSEHCAKHL------------LESIIST---------------------- 82
            |.|||||.|  |  .|||....::            ||:.:.|                      
Zfish   137 FGVFDGHGGHACAQAVSERLPYYISVAMMAESVLEDLEAAMETSRPVPPILQWYKHHNDYNYRES 201

  Fly    83 ------------EEFIGG-DHVKGIRT------GFLRID---------EVMRELPEFTRESEKCG 119
                        :|.:.. :|..|:|.      .|.|:|         .:..:|...|.......
Zfish   202 AALYVDHLRVFWQELLASEEHGDGMRPADALSYAFQRLDTDLSLEAQVPLANDLMRNTALQAAFA 266

  Fly   120 GTTAVCAFVGLTQVYIANCGDSRAVLCRQ-------GVPVFATQDHKPILPEEKERIYNAGGS-- 175
            |.||..|.||...|::||.||.||||..|       .:|:  |:||......|.||::....:  
Zfish   267 GCTACVAHVGPEGVHVANAGDCRAVLGVQEADGSWSALPL--TKDHNAANVAEMERVWRQHPASE 329

  Fly   176 ----VMIKRVNGTLAVSRALGDYDFK-------NVKEKGQCE-------QLVSPE---------- 212
                |:..|:.|.|...||.||..||       :|.|.|..:       |...|.          
Zfish   330 RQTVVVDDRLLGVLMPLRAFGDVRFKWSRELQQSVLENGDSDLEALNIYQYAPPNYLTPPYLEVT 394

  Fly   213 PEIFCQSRQDSDEFLVLACDGIWDVMSNEDVCSF-------IHSRMRVTSNLVSIANQVVDTCLH 270
            ||:.....:..|.||:||.||:||.|||::....       :|.:..|::..::: .|:....|.
Zfish   395 PEVTHHRLRPQDRFLILASDGLWDEMSNDEAVRLVAEHLTGVHLQAPVSARQLNL-GQMHQLLLR 458

  Fly   271 KGSRDNMSIIIIAFPGAPKPTEEAIEAEHRLEKQIEKITRDEIESSKITDYVDLLKCLQN--RDD 333
            :.:|             ..|..:...|.|.:...:......|::..::...:.|...|..  |||
Zfish   459 RRAR-------------ATPALDLNAATHLIRHALGTNEYGEMDQERLATMLALPSDLARMYRDD 510

  Fly   334 I 334
            |
Zfish   511 I 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 80/337 (24%)
PP2C_C 278..352 CDD:285117 10/59 (17%)
pdp2NP_571700.1 PP2Cc 109..517 CDD:238083 90/391 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577940
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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