DRSC/TRiP Functional Genomics Resources

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Protein Alignment alph and pdp1

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001104628.1 Gene:pdp1 / 558728 ZFINID:ZDB-GENE-060810-70 Length:519 Species:Danio rerio


Alignment Length:364 Identity:76/364 - (20%)
Similarity:123/364 - (33%) Gaps:142/364 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EGEGNKLLFGVSSMQGWRSE-------MEDAYYARAGLGDALPDWSFFAVFDGHAGCKVSEHCAK 73
            |.:|..|    ||:.|:.|.       :||...|...|...   ...:.||||||||..::..::
Zfish    87 EFDGKNL----SSVMGFDSNQLPANAPIEDRRSAATCLQTR---GMLYGVFDGHAGCACAQALSE 144

  Fly    74 HLL----------ESIISTEEFIGG---------------------------------------- 88
            .|.          |::|..|..:..                                        
Zfish   145 RLFYYIAVSLLPHETLIELENAVENGRPLHPILQWHKHPNDYFSKEASRLYFSSLRTYWQELLDL 209

  Fly    89 -------DHVKGIRTGFLRIDEVMRELPEFTRESE---------------KCGGTTAVCAFVGLT 131
                   :..:.:.|.|.|:|.      :.:.|::               ...|.||..|.:...
Zfish   210 SVPGEQPEVAEALVTAFKRLDN------DISLEAQVGDPNAFLHYWVLRVAFSGATACVAHIDGN 268

  Fly   132 QVYIANCGDSRAVLCRQGV--------PVFATQDHKPILPEEKERIY----NAGGSVMIK--RVN 182
            ::::||.||.||||   ||        .:..|.||......|.:|:.    ::....::|  |:.
Zfish   269 ELHVANTGDGRAVL---GVQEPDGSFSALTLTNDHNAQNESEVQRVRSEHPHSEAKTVVKQDRLL 330

  Fly   183 GTLAVSRALGDYDFK-------NVKEKGQCEQL------------------VSPEPEIFCQSRQD 222
            |.|...||.||..||       .|.|.|. :||                  ::.|||:.....:.
Zfish   331 GLLMPFRAFGDVKFKWSIELQRRVLESGP-DQLHENEHAKFIPPNYHTPPYLTAEPEVTRHRLRP 394

  Fly   223 SDEFLVLACDGIWDVMSNEDVCSF-------IHSRMRVT 254
            .|.||||..||:|:.:..::|...       :|.::.|:
Zfish   395 QDRFLVLGSDGLWETLHRQEVVRIVGEHLTGVHQQLPVS 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 73/356 (21%)
PP2C_C 278..352 CDD:285117
pdp1NP_001104628.1 PP2Cc 96..511 CDD:238083 71/351 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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