DRSC/TRiP Functional Genomics Resources

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Protein Alignment alph and pdp1

DIOPT Version :10

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001104628.1 Gene:pdp1 / 558728 ZFINID:ZDB-GENE-060810-70 Length:519 Species:Danio rerio


Alignment Length:364 Identity:76/364 - (20%)
Similarity:123/364 - (33%) Gaps:142/364 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EGEGNKLLFGVSSMQGWRSE-------MEDAYYARAGLGDALPDWSFFAVFDGHAGCKVSEHCAK 73
            |.:|..|    ||:.|:.|.       :||...|...|...   ...:.||||||||..::..::
Zfish    87 EFDGKNL----SSVMGFDSNQLPANAPIEDRRSAATCLQTR---GMLYGVFDGHAGCACAQALSE 144

  Fly    74 HLL----------ESIISTEEFIGG---------------------------------------- 88
            .|.          |::|..|..:..                                        
Zfish   145 RLFYYIAVSLLPHETLIELENAVENGRPLHPILQWHKHPNDYFSKEASRLYFSSLRTYWQELLDL 209

  Fly    89 -------DHVKGIRTGFLRIDEVMRELPEFTRESE---------------KCGGTTAVCAFVGLT 131
                   :..:.:.|.|.|:|.      :.:.|::               ...|.||..|.:...
Zfish   210 SVPGEQPEVAEALVTAFKRLDN------DISLEAQVGDPNAFLHYWVLRVAFSGATACVAHIDGN 268

  Fly   132 QVYIANCGDSRAVLCRQGV--------PVFATQDHKPILPEEKERIY----NAGGSVMIK--RVN 182
            ::::||.||.||||   ||        .:..|.||......|.:|:.    ::....::|  |:.
Zfish   269 ELHVANTGDGRAVL---GVQEPDGSFSALTLTNDHNAQNESEVQRVRSEHPHSEAKTVVKQDRLL 330

  Fly   183 GTLAVSRALGDYDFK-------NVKEKGQCEQL------------------VSPEPEIFCQSRQD 222
            |.|...||.||..||       .|.|.|. :||                  ::.|||:.....:.
Zfish   331 GLLMPFRAFGDVKFKWSIELQRRVLESGP-DQLHENEHAKFIPPNYHTPPYLTAEPEVTRHRLRP 394

  Fly   223 SDEFLVLACDGIWDVMSNEDVCSF-------IHSRMRVT 254
            .|.||||..||:|:.:..::|...       :|.::.|:
Zfish   395 QDRFLVLGSDGLWETLHRQEVVRIVGEHLTGVHQQLPVS 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 73/356 (21%)
PP2C_C 278..355 CDD:429684
pdp1NP_001104628.1 PP2Cc 96..511 CDD:238083 71/351 (20%)
Blue background indicates that the domain is not in the aligned region.

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