DRSC/TRiP Functional Genomics Resources

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Protein Alignment alph and ppm1a

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001016158.2 Gene:ppm1a / 548912 XenbaseID:XB-GENE-852654 Length:383 Species:Xenopus tropicalis


Alignment Length:372 Identity:196/372 - (52%)
Similarity:256/372 - (68%) Gaps:13/372 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGFLDKPKTAKHNDEGEGNKLLFGVSSMQGWRSEMEDAYYARAGLGDALPDWSFFAVFDGHAGC 65
            ||.||||||..|||..|:||.|.:|:|||||||.|||||:.|..||.:.|..||||||:|||||.
 Frog     1 MGAFLDKPKMEKHNAHGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPNGLDAWSFFAVYDGHAGS 65

  Fly    66 KVSEHCAKHLLESIISTEEFIGGD-HV------KGIRTGFLRIDEVMRELPEFTRESEKCGGTTA 123
            :|:::|.:|||:.|.|.::|.|.| |:      .|||||||:|||.||.:.|....::: .|:||
 Frog    66 QVAKYCCEHLLDHITSNQDFKGTDGHLSVWSVKNGIRTGFLQIDEHMRVISEKKHGADR-SGSTA 129

  Fly   124 VCAFVGLTQVYIANCGDSRAVLCRQGVPVFATQDHKPILPEEKERIYNAGGSVMIKRVNGTLAVS 188
            |........:|..||||||.:|||.....|.||||||..|.|||||.||||||||:||||:||||
 Frog   130 VGVMTSPNHIYFINCGDSRGLLCRSKKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVS 194

  Fly   189 RALGDYDFKNVKEKGQCEQLVSPEPEIF-CQSRQDSDEFLVLACDGIWDVMSNEDVCSFIHSRMR 252
            |||||:|:|.|..||..|||||||||:: .:..::.|:|::||||||||||.||::|.|:.||:.
 Frog   195 RALGDFDYKCVHGKGPTEQLVSPEPEVYEIERSEEDDQFIILACDGIWDVMGNEELCDFVWSRLE 259

  Fly   253 VTSNLVSIANQVVDTCLHKGSRDNMSIIIIAFPGAPKPTEEAIEAEHRLEKQIEKITRDEIE--- 314
            ||.:|..:.|::|||||:||||||||:|:|.||.|||...||::.|..|:|.:|....|.|:   
 Frog   260 VTDDLERVCNEIVDTCLYKGSRDNMSVILICFPSAPKVLPEAVKREAELDKYLEGRVEDIIKKQG 324

  Fly   315 SSKITDYVDLLKCLQNRDDIEGLPPGGGLQSKYHVIERTFKQEFPDR 361
            ...:.|.|.:::.|.: ::|..|||||.|.||..|||..:.:..|.|
 Frog   325 EEGVPDLVHVMRTLAS-ENIPNLPPGGELASKRSVIEAVYNRLNPYR 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 151/267 (57%)
PP2C_C 278..352 CDD:285117 30/76 (39%)
ppm1aNP_001016158.2 PP2C 22..284 CDD:366121 147/262 (56%)
PP2C_C 285..361 CDD:369544 30/76 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 306 1.000 Domainoid score I1353
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 383 1.000 Inparanoid score I1998
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D262211at33208
OrthoFinder 1 1.000 - - FOG0000692
OrthoInspector 1 1.000 - - mtm9541
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R955
SonicParanoid 1 1.000 - - X444
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.090

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