DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alph and ppm1g

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_012810508.1 Gene:ppm1g / 548557 XenbaseID:XB-GENE-5916413 Length:550 Species:Xenopus tropicalis


Alignment Length:539 Identity:129/539 - (23%)
Similarity:188/539 - (34%) Gaps:250/539 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGFLDKPKTAKHNDEGEGNKLLFGVSSMQGWRSEMEDAYYARAGLGDALP----DWSFFAVFDG 61
            ||.:|.:|.|.|.:.:|.|::|.:|.|:|||||..||||:       :.:|    :.:.|:|:||
 Frog     1 MGAYLSQPNTDKSSGQGGGHRLSYGYSAMQGWRVSMEDAH-------NCIPELDSETAMFSVYDG 58

  Fly    62 HAGCKVSEHCAKHLLESIISTEEFIGGDHVKGIRTGFLRID------EVMRELPE---------- 110
            |.|.:|:.:|||:|.|.|.|.:.:..|...|.:...||.||      ||::||.:          
 Frog    59 HGGEEVALYCAKYLPEVIKSQKAYKDGKLQKALEDAFLAIDQKLTQEEVIKELAQMAGRPINDHD 123

  Fly   111 -------------------------------FTR------------------------------- 113
                                           .||                               
 Frog   124 CGKEKVADEDDVDNEEAALLHEEATMTIEELLTRYGQNCAKTPRTKAGGQAEEKKGPEEEETKEV 188

  Fly   114 ----------------------------------------------------------------- 113
                                                                             
 Frog   189 SVNGDLDSTGGDCQKKNGKSEGKVTASVGVSSSGEAGGSTSSPKAGCLRPKGLHANEPVSSSTGE 253

  Fly   114 ---------------------------------ESEKC--------------------------- 118
                                             :||:|                           
 Frog   254 AGPSCSSSPTKPQPTSKSKFFEDSEESEAEEEEDSEECSEEDYSSEEAENEEEDEEDSEDAEEEE 318

  Fly   119 ------------------GGTTAVCAFVGLTQVYIANCGDSRAVLCRQGVPVFATQDHKPILPEE 165
                              .|||||.|.:...|:.:||.||||.|:...|..:..:.||||....|
 Frog   319 DEEMMLPGMAGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEGGKALDMSYDHKPEDELE 383

  Fly   166 KERIYNAGGSV-MIKRVNGTLAVSRALGDYDFKNVKEKGQCEQLVSPEPEIFCQSRQDSDEFLVL 229
            ..||.||||.| |..||||.|.:|||:||:.:|..|.....||::|..|:|...:..:..||:||
 Frog   384 LARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVVTLSEEHEFMVL 448

  Fly   230 ACDGIWDVMSNEDVCSFIHSRMR------VTSNLVSIANQVVDTCLHKGSR------DNMSIIII 282
            ||||||:|||:::|..|:|.::.      .|.:|.||..:::|.||...:.      |||:.|||
 Frog   449 ACDGIWNVMSSQEVVDFVHEKIESQLQKGETLSLTSIVEELLDQCLAPDTSGDGTGCDNMTCIII 513

  Fly   283 AF-----PGAPKPTEEAIE 296
            .|     |.||:..:..:|
 Frog   514 DFRPHCPPSAPEAAKRKVE 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 115/497 (23%)
PP2C_C 278..352 CDD:285117 8/24 (33%)
ppm1gXP_012810508.1 PP2Cc 14..>107 CDD:214625 35/99 (35%)
PP2Cc <331..513 CDD:214625 72/181 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D957254at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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