DRSC/TRiP Functional Genomics Resources

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Protein Alignment alph and Ppm1d

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_058606.3 Gene:Ppm1d / 53892 MGIID:1858214 Length:598 Species:Mus musculus


Alignment Length:467 Identity:125/467 - (26%)
Similarity:172/467 - (36%) Gaps:146/467 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GVS--SMQGWRSEMED---------------------------AYYARAGLG----------DAL 50
            |||  |.||.|..|||                           |....||:|          |..
Mouse     8 GVSVFSDQGGRKYMEDVTQIVVEPEPAAEDKPAPVPRRALGLPATPTLAGVGPSEKGPAAARDPA 72

  Fly    51 PD----------------WSFFAVFDGHAGCKVSEHCAKHLLESIISTEEFIGGDHVK---GIRT 96
            ||                .:||||.|||.|.:.::...:||...|...:.|...:..|   .||.
Mouse    73 PDAAASLPAGRCCRRRSSVAFFAVCDGHGGREAAQFAREHLWGFIKKQKGFTSSEPAKVCAAIRK 137

  Fly    97 GFLRIDEVM----RELPEFTRESEKCGGTTAVCAFVGLTQVYIANCGDSRAVLCRQGVP------ 151
            |||.....|    .|.|:.........||||....:...::|:|:.|||..||..|..|      
Mouse   138 GFLACHLAMWKKLAEWPKTMTGLPSTSGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVR 202

  Fly   152 -VFATQDHKPILPEEKERIYNAGGSVMIKR-VNGT------------------------LAVSRA 190
             |..||||||.||:|:|||...|||||.|. ||..                        |||:||
Mouse   203 AVEVTQDHKPELPKERERIEGLGGSVMNKSGVNRVVWKRPRLTHSGPVRRSTVIDQIPFLAVARA 267

  Fly   191 LGD---YDFKNVKEKGQCEQLVSPEPEIFCQSRQD-SDEFLVLACDGIWDVMSNEDVCSFI---- 247
            |||   |||.:.|      .:|||||:....:... ..::::|..||:|:::..:|..|..    
Mouse   268 LGDLWSYDFFSGK------FVVSPEPDTSVHTLDPRKHKYIILGSDGLWNMVPPQDAISMCQDQE 326

  Fly   248 HSRMRVTSNLVSIANQVVDTCLHKGSR-----DNMSIIIIAFPGAPKPTEEAIEAEHRLEKQIEK 307
            ..:..:.....|.|..:|:..|.:..:     ||.|.|:|..  :|:           ::.|...
Mouse   327 EKKYLMGEQGQSCAKMLVNRALGRWRQRMLRADNTSAIVICI--SPE-----------VDNQGNF 378

  Fly   308 ITRDEIESSKITD---YVDLLKCLQNRDDIEGLPP--------GGGLQSKYH----VIERTFKQE 357
            ...||: ...:||   |.....|:..... ...||        ...|.||.|    |....|.::
Mouse   379 TNEDEL-FLNLTDSPTYNSQETCVMTSSP-SSTPPIKSPEEDAWPRLSSKDHIPALVRSNAFSEK 441

  Fly   358 FPDRPCE---GN 366
            |.:.|.|   ||
Mouse   442 FLEVPAEIARGN 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 104/365 (28%)
PP2C_C 278..352 CDD:285117 18/88 (20%)
Ppm1dNP_058606.3 Interaction with CHEK1. /evidence=ECO:0000250 1..94 17/85 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..74 5/24 (21%)
PP2C 84..361 CDD:278884 83/282 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..419 3/21 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 509..584
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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