DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alph and ppm1j

DIOPT Version :10

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001005797.1 Gene:ppm1j / 448275 XenbaseID:XB-GENE-941439 Length:257 Species:Xenopus tropicalis


Alignment Length:187 Identity:46/187 - (24%)
Similarity:71/187 - (37%) Gaps:68/187 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KHNDEGEGNKLLFGVSSMQGWR--SEMEDAYYARAGLGDALPDWSFFAVFDGHAGC--------K 66
            |.|.:....|.|..:..:||.:  |:.:|      ||     .:.::.:|||||||        .
 Frog    78 KQNAKFSDCKELQDLKIVQGEKCLSQEDD------GL-----SFYYWGLFDGHAGCGCAIAASRL 131

  Fly    67 VSEHCAKHLLESI----------ISTEEFIGGDHVKGIRT------------------------- 96
            :..|...||.:.:          :|.:.....||:.||::                         
 Frog   132 LHLHICDHLRDLVHILPHSAAAPLSLDPGNRIDHMAGIKSLENAQAPEVAVRFHLEKQVFPESLV 196

  Fly    97 ------GFLRIDE-VMRELPEFTRESEKCGGTTAVCAFVGLTQVYIANCGDSR-AVL 145
                  .|..:|| :.||...:..|    ||..|:.|...|.::|:||.|||| |||
 Frog   197 IGAIENAFKEMDEQIKRERTTYKIE----GGCCALVAVYLLGKLYVANAGDSRYAVL 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 42/175 (24%)
PP2C_C 278..355 CDD:429684
ppm1jNP_001005797.1 PP2Cc 106..>253 CDD:469621 39/159 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.