DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alph and ppm1na

DIOPT Version :10

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_998046.2 Gene:ppm1na / 405817 ZFINID:ZDB-GENE-040426-2731 Length:433 Species:Danio rerio


Alignment Length:376 Identity:180/376 - (47%)
Similarity:243/376 - (64%) Gaps:23/376 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FLDKPKTAKHNDEGEGN-KLLFGVSSMQGWRSEMEDAYYARAGLGDALPDWSFFAVFDGHAGCKV 67
            :|::|..||.:.|||.. .:.:.::||||||::|||::.....:.|||||||:|||:|||||..|
Zfish    55 YLERPILAKDSAEGESKWGITYAMASMQGWRAQMEDSHTCMPEMSDALPDWSYFAVYDGHAGRTV 119

  Fly    68 SEHCAKHLLESIIST-----EEFIGGDHVK-GIRTGFLRIDEVMRELPEFTRESEKCGGTTAVCA 126
            :::.::|||:.|:.|     ||.:  :.|| |||.|||.||..|..|..  .||....|:||...
Zfish   120 AQYSSRHLLDFILDTGCVTVEEDV--EQVKDGIREGFLAIDRHMHTLSR--NESWDHSGSTAASV 180

  Fly   127 FVGLTQVYIANCGDSRAVLCRQGVPVFATQDHKPILPEEKERIYNAGGSVMIKRVNGTLAVSRAL 191
            .:.....|..||||||..|||.|..||.|:||||..|.|||||.||||||.::|:||:|||||||
Zfish   181 MISPRNFYFINCGDSRTFLCRDGHVVFYTEDHKPCNPREKERIQNAGGSVTLQRINGSLAVSRAL 245

  Fly   192 GDYDFKNVKEKGQCEQLVSPEPEIFCQSRQDSDEFLVLACDGIWDVMSNEDVCSFIHSRMRVTSN 256
            ||:|||.|:.:.|.|||||||||::...|...|||||:||||:||.:.|||:|:|:.:|:.|..:
Zfish   246 GDFDFKEVEWRAQTEQLVSPEPEVYELERSPEDEFLVVACDGVWDAIGNEDLCAFVRNRLHVCDD 310

  Fly   257 LVSIANQVVDTCLHKGSRDNMSIIIIAFPGAPKPTEEAIEAEHRLEKQIEK-------ITRDEIE 314
            |..|.:||:|.||:|||.|||:||||.|.||||.|:||::.|..||:.||:       :.|.:.|
Zfish   311 LREICSQVIDLCLYKGSLDNMTIIIICFDGAPKVTQEALQQEAELEQLIEQKVAEIIHVIRSKDE 375

  Fly   315 SSKITDYVDLLKCLQNRDDIEGLPPGGGLQSKYHVIERTF-KQEFPDRPCE 364
            .   .|.:.::|.|.: :.|.|||||||:..|...|...: |.....||.|
Zfish   376 E---PDLLYVMKFLAS-EPIPGLPPGGGVSCKRDCIIAAYQKYAAAFRPLE 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 141/265 (53%)
PP2C_C 278..355 CDD:429684 32/84 (38%)
ppm1naNP_998046.2 PP2Cc 76..338 CDD:238083 141/265 (53%)
PP2C_C 332..412 CDD:429684 32/83 (39%)

Return to query results.
Submit another query.