DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alph and tab1

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_002662286.4 Gene:tab1 / 403084 ZFINID:ZDB-GENE-060628-1 Length:491 Species:Danio rerio


Alignment Length:400 Identity:82/400 - (20%)
Similarity:146/400 - (36%) Gaps:99/400 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 FAVFDGHAGCKVSEHCAKHLLESIISTEEFIGGDHVKGIR------------TGFLRIDEVMRE- 107
            :.||:|..|.:|:....:.|...:: ..:...||....:|            :.|..||:.:.| 
Zfish    54 YGVFNGFEGSRVASFVCQCLTAELL-LGQLSSGDTDADVRRILTQAFDVVEKSYFETIDDALAEK 117

  Fly   108 ------LPE---------------FTRESEKCGGTTAVCAFVGLTQVYIANCGDSRAVLCR---- 147
                  |||               .|.|.|...|.||:.|.:...::||||.|.:||:||:    
Zfish   118 ANLQTQLPEGAYVSAQTHNIADRLKTLEQEVTRGATAIVALILKNKLYIANVGTNRALLCKTTSD 182

  Fly   148 -QGVPVFATQDHKPILPEEKERIYNAGGSVMIKRVNGTLAVS-----RALGDYDFK------NVK 200
             |...:...:.|.....:|..|:...|...:  |:..|..:|     |.:|||..|      :|.
Zfish   183 GQNQVIQIGRAHTTDNEDELTRLAQLGLDPV--RLRQTAVISGQSSTRRIGDYKVKFNYTDIDVL 245

  Fly   201 EKGQCEQLVSPEPEIF-CQSRQDSDEFLVLACDGIWDVMS--------NEDVCSFIHSRMRVTSN 256
            ...:.:.::: ||||. .||......||:|..:|:...:.        |::|.:.:.:.:....:
Zfish   246 SAAKHKPIIA-EPEIHGGQSLAGVTGFLLLMSEGLIKALEAAHGPEQVNQEVVAMVAAELAQQGS 309

  Fly   257 LVSIANQVVDT------------------CLHKGSRDNMSIIIIAF-----PGAPKPTEEA---- 294
            |.:.|..||:.                  |.|   .::|:::|...     .|:..||:..    
Zfish   310 LEAAAQAVVERVKRLHHDVFVSGRQRAQHCAH---HEDMTLLIRVINYTLADGSLTPTQGGRIYP 371

  Fly   295 IEAEHRLEKQIEK--ITRDEIESSKITDYVDLLKCLQNRDDIEGLPPGGGLQSKYHVIERTFKQE 357
            :...:...:...|  :|...:..::.|    |.........:||..|..|.||....::.|....
Zfish   372 VSVPYSNHQSTSKTSVTLSLVMPAQGT----LTNGSSTSSTLEGDTPTAGNQSPSTTLQSTNTHT 432

  Fly   358 FPDRPCEGNG 367
            .......|:|
Zfish   433 QSSSSSSGDG 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 66/304 (22%)
PP2C_C 278..352 CDD:285117 14/84 (17%)
tab1XP_002662286.4 PP2Cc 26..327 CDD:238083 62/276 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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