DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alph and ppm1g

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_005169569.1 Gene:ppm1g / 368275 ZFINID:ZDB-GENE-030425-4 Length:537 Species:Danio rerio


Alignment Length:530 Identity:128/530 - (24%)
Similarity:184/530 - (34%) Gaps:239/530 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGFLDKPKTAKHNDEGEGNKLLFGVSSMQGWRSEMEDAYYARAGLGDALPDWSFFAVFDGHAGC 65
            ||.:|.:|.|.|....|....|.:|.|:|||||..||||:.....|.|   :.:.|||:|||.|.
Zfish     1 MGAYLSQPNTEKSTGNGGSKNLNYGFSAMQGWRVSMEDAHNCIPELDD---ETAMFAVYDGHGGE 62

  Fly    66 KVSEHCAKHLLESIISTEEFIGGDHVKGIRTGFLRID------EVMREL---------------- 108
            :|:.:|:|:|...|...:.:..|...|.:...||.||      ||::||                
Zfish    63 EVALYCSKYLPGIIKEQKTYKEGKLQKALEDAFLDIDARITTEEVIKELVQIAGRPQEETEKVAD 127

  Fly   109 ---------------------------------------PEFTRESE---------------KCG 119
                                                   ||.::|||               :||
Zfish   128 EDDVDNEEAALLHEEATMTIEELLTRYGQNQNKNAKKPCPEASKESEDGEKSHAEKGINGETECG 192

  Fly   120 ----------------------------------------------------------------- 119
                                                                             
Zfish   193 PSVVDSIGKKPAGAGNAAEGSKMRACRRAAASGGSASEGSAEKSGDAGPSCSSSAAAPPGSAKSK 257

  Fly   120 ----------------------------------------------------------------- 119
                                                                             
Zfish   258 FFEDSEESGEEEEEEEGSEEEDGSEEDGENSSENEEEDDTEEGEEEDTDEEEEMCLPGMDGKEEP 322

  Fly   120 ----GTTAVCAFVGLTQVYIANCGDSRAVLCRQGVPVFATQDHKPILPEEKERIYNAGGSV-MIK 179
                |||||.|.:...|:.:||.||||.|:..:|..:..:.||||....|..||.||||.| |..
Zfish   323 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEKGKALDMSYDHKPEDELELARIKNAGGKVTMDG 387

  Fly   180 RVNGTLAVSRALGDYDFKNVKEKGQCEQLVSPEPEIFCQSRQDSDEFLVLACDGIWDVMSNEDVC 244
            ||||.|.:|||:||:.:|..|.....||::|..|::...:..|..||:|:||||||:|||:::|.
Zfish   388 RVNGGLNLSRAIGDHFYKRNKALPAEEQMISALPDVKVLTLNDDHEFMVIACDGIWNVMSSQEVI 452

  Fly   245 SFIHSRMRVTSN----LVSIANQVVDTCLHKGSR------DNMSIIIIAFPGAP----------- 288
            .|:..||:..|.    |.:|.::::|.||...:.      |||:.:|:.|  :|           
Zfish   453 DFVSERMKTESGKNNPLSAIIDELLDHCLAPDTSGDGTGCDNMTCMIVTF--SPRSGSNVAEGTK 515

  Fly   289 --KPTEEAIE 296
              ||.|.|:|
Zfish   516 KRKPEETAVE 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 113/480 (24%)
PP2C_C 278..352 CDD:285117 8/32 (25%)
ppm1gXP_005169569.1 PP2Cc 24..>109 CDD:214625 33/87 (38%)
PP2Cc <323..502 CDD:238083 71/178 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D957254at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100270
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.720

Return to query results.
Submit another query.