DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alph and CG7115

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001260216.1 Gene:CG7115 / 34069 FlyBaseID:FBgn0027515 Length:524 Species:Drosophila melanogaster


Alignment Length:397 Identity:96/397 - (24%)
Similarity:146/397 - (36%) Gaps:143/397 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GWRSEMEDAYYARAGLGDALPDWSFFAVFDGHAGCKVSEHC----AKHLLESIISTEEFI----- 86
            |.|..|||.:.....:.:. ...|||||||||.|...::..    .|::...||...:.:     
  Fly   118 GRRPRMEDRFIIEENINNN-TGISFFAVFDGHGGEFAADFAKDVLVKNIYNKIIEMSKLLKTEGN 181

  Fly    87 GGDHVKG---------------------------------------------------------- 93
            .||:.|.                                                          
  Fly   182 SGDYDKSPYLARKQSRKDANKENTEPTAGVMRKDSLRKAHSTTADCSAIKQKTTEASIADIYTVQ 246

  Fly    94 -----------------------------------------------IRTGFLRIDEVMR---EL 108
                                                           |..|.|..||:|.   :|
  Fly   247 LNSAMRASGNLGAAKDSFLNNNNNGQNGAANAPPPNYEAKCYIEHGRINFGKLITDEIMSADYKL 311

  Fly   109 PEFTRESEKCGGTTAVCAFVGLTQVYIANCGDSRAVLCR-QGVPVFATQDHKPILPEEKERIYNA 172
            .|..:.:....||||:.|.|..:::.:||.||||.|:.. :|:.:..:.||||....|::||::|
  Fly   312 VEQAKRATNIAGTTALIAIVQGSKLIVANVGDSRGVMYDWRGIAIPLSFDHKPQQVRERKRIHDA 376

  Fly   173 GGSVMIK---RVNGTLAVSRALGDYDFKNVKEKGQCEQLVSPEPEIFCQSRQD-SDEFLVLACDG 233
            ||.:..:   ||.|.||.|||||||..|:       :.||...|:|......| ...||:||.||
  Fly   377 GGFIAFRGVWRVAGVLATSRALGDYPLKD-------KNLVIATPDILTFELNDHKPHFLILASDG 434

  Fly   234 IWDVMSNEDVCSFIHSRMRVTS-NLVSIANQVVDTCLHKGSRDNMSIIIIAF--------PGAPK 289
            :||..|||:.|:|....::... ...|:|.:    ...:||.||:::::|.|        ..|.|
  Fly   435 LWDTFSNEEACTFALEHLKEPDFGAKSLAME----SYKRGSVDNITVLVIVFKNDVYKIGSSAGK 495

  Fly   290 PTEEAIE 296
            ..||:::
  Fly   496 AGEESLK 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 91/375 (24%)
PP2C_C 278..352 CDD:285117 6/27 (22%)
CG7115NP_001260216.1 PP2Cc 111..482 CDD:238083 91/375 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445100
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.