DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alph and CG17598

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001259780.1 Gene:CG17598 / 33140 FlyBaseID:FBgn0031194 Length:651 Species:Drosophila melanogaster


Alignment Length:484 Identity:97/484 - (20%)
Similarity:167/484 - (34%) Gaps:192/484 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SSMQGWRSEMEDAYYARAGLGD---ALPD--WSFFAVFDGHAG---CKVSEHCAKHLL-ESIIST 82
            |....|..  :...:.|..|.|   ..||  :::|.:||||||   ...:.|...|:| |.::..
  Fly   105 SGKSEWNE--DQGAFCRQVLSDPEHKHPDLPYTYFGIFDGHAGYGAALAASHQFHHILHEKLVDC 167

  Fly    83 EEFI----------GGDHVK-----------------------GIRTGFLRIDEVMRELPEFTRE 114
            .|.:          ||:..|                       .:.:.|..:|.::.:..:..|:
  Fly   168 LELLLPRDADATNGGGEGNKLNPTFPHPIYFQRRVTKDELIIGALESAFFNMDSLIAQDCDRYRD 232

  Fly   115 SEKCGGTTAVCAFVGLTQVYIANCGDSRAVLCRQ-------------GV----------PVFATQ 156
            :..|  |..|..|:. .::|:||.||||||||::             |:          ||..:.
  Fly   233 AGGC--TACVSLFID-GKMYVANAGDSRAVLCQRRATPERPQTNTDSGIEPDPLEASCYPVPFSA 294

  Fly   157 DHKPILPEEKERIYNA--------------------------GGSVMIK---------------- 179
            ||.|  ..|:||:.|.                          |..::.:                
  Fly   295 DHTP--ETERERLLNVARLKPHLMGKHYVAMEYAKRPHIKDMGQRILCRQGTMRGWTYKTLTMED 357

  Fly   180 -------------RVNGTLAVSRALGDYDFKNVKEKGQCEQLVSPEPEIFCQSRQ---------- 221
                         |:.|||.|:|..||::...:....|.:..::|.|::    ||          
  Fly   358 LCMPVVNGEGKRSRLLGTLGVTRGFGDHELLAINTGIQIKPFLTPHPDV----RQRDLTQVVSIP 418

  Fly   222 DSDE------FLVLACDGIWDVMSNEDVCSFI-----------HSRMRVTSNLVSIANQVVDTCL 269
            |.|.      .||:|.||:|||..|:.|...:           |....|...||:.|...::...
  Fly   419 DEDNRDGDYGVLVMATDGLWDVSENDAVSRTVFQTLSKYSTEKHRYTMVAQELVARARGKINDSG 483

  Fly   270 H--------KGSRDNMSIIIIAFPGAPKPT----EEAIEAEHRLEKQIEKITRDEIESSKITDYV 322
            |        ..:.|::|:|:|       |.    :|.:|.....::.:|. .|.:.::....:.|
  Fly   484 HWRLADSKAAATVDDISVIVI-------PVCQYYKEHVEWTQNYKRDLEH-RRRQAQAHMAQEAV 540

  Fly   323 DLLKCLQNRDDIEGLPPGGGLQSKYHVIE 351
            ::|              .|.:..:.||:|
  Fly   541 NVL--------------NGVIAEEAHVVE 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 86/411 (21%)
PP2C_C 278..352 CDD:285117 14/78 (18%)
CG17598NP_001259780.1 PP2Cc 98..506 CDD:238083 86/418 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445114
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.