DRSC/TRiP Functional Genomics Resources

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Protein Alignment alph and Pdp

DIOPT Version :10

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_572404.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster


Alignment Length:392 Identity:88/392 - (22%)
Similarity:136/392 - (34%) Gaps:111/392 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SEMEDAYYARAGLGDALPDWSFFAVFDGHAGCKVSEHCAKHLLESI--------ISTEEFIGG-- 88
            |..|.::..|.|.        ...:||||||....:..:|.||..:        :..|:...|  
  Fly    75 SRTEASFLHRNGF--------ICGIFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQMKQGAD 131

  Fly    89 ------------DHVKGIR----TGFLRIDEVMRELPEFTRESE--------------------- 116
                        |.|..|:    ..||:....:.|.|:....||                     
  Fly   132 SQSFLKCHNDNVDFVSMIKPMYEASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSND 196

  Fly   117 ------KCGGTTAVCAFVGLTQVYIANCGDSRAVLCRQGVPVFATQD-HKPILPEEKERIYNAGG 174
                  ...|..|....:...|:::|:.||..|||   ||....||. |...|..|    :||..
  Fly   197 VRTMNVALSGAVACLVHIEGLQMHVASTGDCGAVL---GVLDPQTQQWHSKKLNIE----HNADN 254

  Fly   175 SVMIKRV--------------NG----TLAVSRALGDYDFKNVKEKGQCE-------QLVSP--- 211
            ...::|:              ||    .||..||.||:.:|..:|..|.:       |.::|   
  Fly   255 MSEVRRILAEHPKEEHETVIRNGRLLSQLAPLRAFGDFRYKWSQEIMQQKVLPMFGVQAMAPNYY 319

  Fly   212 -------EPEIFCQSRQDSDEFLVLACDGIWDVMSNEDVCSFIHSRMRVTSNLVSIANQVVDTCL 269
                   .|::.......:|:|||:|.||:||.:...:|.|.:...:.....|..:.....||.|
  Fly   320 TPPYLTARPDVQQHELGPNDKFLVIASDGLWDFLPPSEVVSLVGEHINSKKILEPMRLPEGDTTL 384

  Fly   270 HKGSRDNMSIIIIAFPGAPKPTEEAIEAEHRLEKQIEKITRDEIESSKITDYVDLLKCLQN--RD 332
            .:.|:.    :.....|..:...:...|.|.:...:.. |...||.|||:.|:.|.:....  ||
  Fly   385 QEISQQ----LAERKAGLTRKPVDQNAATHLIRHALGG-TDYGIEHSKISYYLTLPRDAVRLYRD 444

  Fly   333 DI 334
            ||
  Fly   445 DI 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 73/338 (22%)
PP2C_C 278..355 CDD:429684 15/59 (25%)
PdpNP_572404.1 PP2Cc 58..394 CDD:238083 73/337 (22%)

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