DRSC/TRiP Functional Genomics Resources

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Protein Alignment alph and ptc3

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_593087.1 Gene:ptc3 / 2542008 PomBaseID:SPAC2G11.07c Length:414 Species:Schizosaccharomyces pombe


Alignment Length:291 Identity:113/291 - (38%)
Similarity:167/291 - (57%) Gaps:12/291 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGFLDKPKTAKHNDEGEGNKLLFGVSSMQGWRSEMEDAYYARAGLG-DALPD-WSFFAVFDGHA 63
            ||..|.:|.|.||:..|....:|:|:|||||||..||||:.|...:. .|:.| ..||||:|||.
pombe     1 MGQTLSEPVTEKHSVNGSNEFVLYGLSSMQGWRISMEDAHSAILSMECSAVKDPVDFFAVYDGHG 65

  Fly    64 GCKVSEHCAKHLLESIISTEEFIGGDHVKGIRTGFLRIDEVMRELPEFTRESEKCGGTTAVCAFV 128
            |.||::.|..:|.:.:....:|..||.|..:::.||..|:.:.:..:|..:...|  |..|...|
pombe    66 GDKVAKWCGSNLPQILEKNPDFQKGDFVNALKSSFLNADKAILDDDQFHTDPSGC--TATVVLRV 128

  Fly   129 GLTQVYIANCGDSRAVLCRQGVPVFATQDHKPILPEEKERIYNAGGSVMIKRVNGTLAVSRALGD 193
            | .::|.||.||||.||..:|:....:.||||....||.||..|||.|...||||.||:|||:||
pombe   129 G-NKLYCANAGDSRTVLGSKGIAKPLSADHKPSNEAEKARICAAGGFVDFGRVNGNLALSRAIGD 192

  Fly   194 YDFKNVKEKGQCEQLVSPEPEIFCQSRQDSDEFLVLACDGIWDVMSNEDVCSFIHSRMRVTSNLV 258
            ::|||...:.: :|:|:..|::......|.|||:|||||||||..:::.|..|:...:...::|.
pombe   193 FEFKNSNLEPE-KQIVTALPDVVVHEITDDDEFVVLACDGIWDCKTSQQVIEFVRRGIVAGTSLE 256

  Fly   259 SIANQVVDTCLHKGSR------DNMSIIIIA 283
            .||..::|.|:...:.      |||::.|:|
pombe   257 KIAENLMDNCIASDTETTGLGCDNMTVCIVA 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 104/268 (39%)
PP2C_C 278..352 CDD:285117 2/6 (33%)
ptc3NP_593087.1 PP2C 24..275 CDD:278884 99/254 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53745
OrthoFinder 1 1.000 - - FOG0000692
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100270
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R955
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

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