DRSC/TRiP Functional Genomics Resources

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Protein Alignment alph and ptc3

DIOPT Version :10

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_593087.1 Gene:ptc3 / 2542008 PomBaseID:SPAC2G11.07C Length:414 Species:Schizosaccharomyces pombe


Alignment Length:291 Identity:113/291 - (38%)
Similarity:167/291 - (57%) Gaps:12/291 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGFLDKPKTAKHNDEGEGNKLLFGVSSMQGWRSEMEDAYYARAGLG-DALPD-WSFFAVFDGHA 63
            ||..|.:|.|.||:..|....:|:|:|||||||..||||:.|...:. .|:.| ..||||:|||.
pombe     1 MGQTLSEPVTEKHSVNGSNEFVLYGLSSMQGWRISMEDAHSAILSMECSAVKDPVDFFAVYDGHG 65

  Fly    64 GCKVSEHCAKHLLESIISTEEFIGGDHVKGIRTGFLRIDEVMRELPEFTRESEKCGGTTAVCAFV 128
            |.||::.|..:|.:.:....:|..||.|..:::.||..|:.:.:..:|..:...|  |..|...|
pombe    66 GDKVAKWCGSNLPQILEKNPDFQKGDFVNALKSSFLNADKAILDDDQFHTDPSGC--TATVVLRV 128

  Fly   129 GLTQVYIANCGDSRAVLCRQGVPVFATQDHKPILPEEKERIYNAGGSVMIKRVNGTLAVSRALGD 193
            | .::|.||.||||.||..:|:....:.||||....||.||..|||.|...||||.||:|||:||
pombe   129 G-NKLYCANAGDSRTVLGSKGIAKPLSADHKPSNEAEKARICAAGGFVDFGRVNGNLALSRAIGD 192

  Fly   194 YDFKNVKEKGQCEQLVSPEPEIFCQSRQDSDEFLVLACDGIWDVMSNEDVCSFIHSRMRVTSNLV 258
            ::|||...:.: :|:|:..|::......|.|||:|||||||||..:::.|..|:...:...::|.
pombe   193 FEFKNSNLEPE-KQIVTALPDVVVHEITDDDEFVVLACDGIWDCKTSQQVIEFVRRGIVAGTSLE 256

  Fly   259 SIANQVVDTCLHKGSR------DNMSIIIIA 283
            .||..::|.|:...:.      |||::.|:|
pombe   257 KIAENLMDNCIASDTETTGLGCDNMTVCIVA 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 104/268 (39%)
PP2C_C 278..355 CDD:429684 2/6 (33%)
ptc3NP_593087.1 PP2C 24..275 CDD:395385 99/254 (39%)

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